Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0892 ATGAAAGGAGAATATGTAGAGGAACACACAAAAACTGAAACACCTAACATGTTCTCAAACCTTAACCAATCTCAACCTCACCACACCCCATTCTCCACCGTCACTACGCCAATCTCCTCCACCGGCGACGGTGCCACCATTGAGGTCGTGCGCCGCCCAAGGGGCCGTCCACGTGGGTCCAAAAACAAGCTCAGACCGCCTCTTATCATAACCCGAGACCTGGAACCTGCTATGAGCCCTTACATTGTAGAAGTTTCTGGCGGAAACGACGTCGTTGAAGCCTTGTCAGGGTTCAGTCGTCAAAAGAATATGGGGTTATGTGTCTTAACTGGTTCTGGAACCGTCGCTAACGTCACTCTCCGTCAGCCTTTAACGACTCCTGGAGCCACCGTTACTTTTCACGGCCGTTTCGATATCCTCTCTATCTCCGCCATCTTTCTTCCACAACAGCAAGGTTCTTCGAGTTCACCACCGATGCAGAACAGTTTCTCTATCTCGCTCGCCGGACCTCAGGGGCAGATCATCGGAGGAATAGTTGCCGGAGCGTTGGTTGCCTCCGGGAATGTGTTCGTGATTGCAGCTTCGTTCAACAACCCTTCATATCATAAGCTGCAGCAGGAGGAAGATGGAGGGAATTCAGTTTCCGGGAGTGGGGAAGGACAGTCGGCGATGGTGTCCGGTGGCGGTGGCGGTGGCGGCGGAGATGGGCAAGGAGAGTCGTGTGGGGGGTCTATGTACAGCTGTCAAATGCCGTCTGATGTGATTTGGGCTCCAACCGCCAGACCACCACCACCACCCTACTGA 804 0.5361 MKGEYVEEHTKTETPNMFSNLNQSQPHHTPFSTVTTPISSTGDGATIEVVRRPRGRPRGSKNKLRPPLIITRDLEPAMSPYIVEVSGGNDVVEALSGFSRQKNMGLCVLTGSGTVANVTLRQPLTTPGATVTFHGRFDILSISAIFLPQQQGSSSSPPMQNSFSISLAGPQGQIIGGIVAGALVASGNVFVIAASFNNPSYHKLQQEEDGGNSVSGSGEGQSAMVSGGGGGGGGDGQGESCGGSMYSCQMPSDVIWAPTARPPPPPY* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0892 267 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 29 266 IPR014476 GO:0003680
Lan15g0892 267 MobiDBLite consensus disorder prediction 203 245 - -
Lan15g0892 267 Pfam Plants and Prokaryotes Conserved (PCC) domain 80 198 IPR005175 -
Lan15g0892 267 ProSiteProfiles PPC domain profile profile. 75 217 IPR005175 -
Lan15g0892 267 MobiDBLite consensus disorder prediction 1 42 - -
Lan15g0892 267 SUPERFAMILY AF0104/ALDC/Ptd012-like 77 210 - -
Lan15g0892 267 CDD DUF296 80 193 IPR005175 -
Lan15g0892 267 MobiDBLite consensus disorder prediction 203 222 - -
Lan15g0892 267 Gene3D - 79 217 - -
Lan15g0892 267 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 17-RELATED 29 266 - -
Lan15g0892 267 MobiDBLite consensus disorder prediction 12 42 - -
Lan15g0892 267 PIRSF ESCAROLA 2 261 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0892 Lan-Chr15 18210460 18211555 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0892 1 265 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 57.951 4.19e-99 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0892 - - gmx:100815772 310.071
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0892 15 18210460 18211555 Lan14g0690 14 13854926 13856118 LSH