Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0885 ATGGCTCCAAGTTTTGACTGTGTTTCAAGCCTTCTCTGTGCCGAAGACAGCAACAGCGTTTTTGATGAAGGTCATTCCGTGTACGAGGACACGTGGCAACATCGTAGGAACCATCAAAGGCATGTCTTTGGTGAATCATATGAGTTGCCATTGCAGGATGATGAGTGTTTTGCGATGATGGTTGAAAAGGAACAACAACACTGGCCTGGTGTTGTTTACTTGAATAGACTACACAGTGGGGATTTGGACTTTGGGGCAAGAAATGAAGCTGTTGATTGGATTGAAAAGAAAGGAAGAGCTTGGACAATGCAATTGTTGGCTGTGGCATGCTTATCTCTGGCTGCCAAAATGGACGAATCGGATGTTCCGATGAGTGTTGATTTGCAGGTGGGTGATACCAAGTTTGTATTTGAAGCTAAAACCATTCAAAGAATGGAGCTTCTTATACTCAGCACATTGAGATGGAGAACGCAAGCAATTACTCCTTTTTCATTCATTGATCATTTCCTCTGCAAGATCAATAATGATCAAAGTCAATTAAGATCTTCAATTATGAAATCTATCCAACTCATATTGAGCACTGCAAGAGGCATTGACTTCTTGGAATTCAAACCATCAGAGATCGCAGCAGCTGTGGCTATGTCCGTAGTGGGGGAAACCAAAACTATTGATACTAGGCAAACAATTGCTGTTCTGATTCCGCAGGCAGAAGAGGAGAGAGTCTTGAAATGTGGTAAAATGGTCCAGGAGCTGTCACTAAACACTGGCATTGCCAAGTATCATTCAAGTGCTTCTGTACCTTGTGTGCCCCAAAGTCCAATAGGGGTTTTAGATGCTTTGAGCTTCAGCTACAAAAGTGATGACACAAATGCTGGTTCATGTGCAAATTCTTCACATAATGATAATAGCCCTGATGCTAAAAGAAGGAAGCTAAATAAAACATGTGGATCAGAGCTATTGTAG 963 0.4195 MAPSFDCVSSLLCAEDSNSVFDEGHSVYEDTWQHRRNHQRHVFGESYELPLQDDECFAMMVEKEQQHWPGVVYLNRLHSGDLDFGARNEAVDWIEKKGRAWTMQLLAVACLSLAAKMDESDVPMSVDLQVGDTKFVFEAKTIQRMELLILSTLRWRTQAITPFSFIDHFLCKINNDQSQLRSSIMKSIQLILSTARGIDFLEFKPSEIAAAVAMSVVGETKTIDTRQTIAVLIPQAEEERVLKCGKMVQELSLNTGIAKYHSSASVPCVPQSPIGVLDALSFSYKSDDTNAGSCANSSHNDNSPDAKRRKLNKTCGSELL* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0885 320 MobiDBLite consensus disorder prediction 290 320 - -
Lan15g0885 320 SUPERFAMILY Cyclin-like 50 156 IPR036915 -
Lan15g0885 320 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 1 95 - -
Lan15g0885 320 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 98 311 - -
Lan15g0885 320 Gene3D - 99 158 - -
Lan15g0885 320 MobiDBLite consensus disorder prediction 302 320 - -
Lan15g0885 320 Gene3D - 159 220 - -
Lan15g0885 320 PANTHER CYCLINS 98 311 IPR039361 -
Lan15g0885 320 PANTHER CYCLINS 1 95 IPR039361 -
Lan15g0885 320 Pfam Cyclin, C-terminal domain 160 256 IPR004367 -
Lan15g0885 320 Pfam Cyclin, N-terminal domain 102 156 IPR006671 -
Lan15g0885 320 CDD CYCLIN 70 150 IPR013763 -
Lan15g0885 320 SMART Cyclin_C_2 160 272 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0885 Lan-Chr15 18137955 18140710 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0885 60 295 Core Cell Cycle Gene Families AT2G22490 43.382 1.52e-63 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0885 K18810 - gmx:100792867 433.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0885 15 18137955 18140710 Lan14g0684 14 13800443 13803022 LSH
Lan15g0885 15 18137955 18140710 Lan3g1554 3 27009502 27011907 LSH