Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0878 ATGGCTTCAGATTCACTCACGTTAATAGGGTTTTGGGGTAGTCCATTTGCCCTCAGGGTCAAGTGGGCACTGGAACTGAAAGGAATTCAGTATCAGTACGTAGAAGAAGATCTAACCAACAAGAGTGCATTGCTCATGCAATATAACCCTGTCTACAAGAAGGTACCAGTTCTTGTGCACCAAGGTAAGTCCCTGGCAGAATCACTTGTGATTCTTGAGTATATTGATGAGACCTGGAAGCAAAATCCTCTTCTTCCACTTGATCCTTATGAAAAGGCCAAGGCACGGTTCTGGTCTAGATTCGTTGATGAAAAGTGTGTGCCAGCAGTTATGACCACCTTTTCCAAGGGAGGGGTGGAGCAAAAGAAAGCTGCAGAAGAAGCTCGAGAGAATCTAAAGACCCTTGAAAGTGGATTTGAGGGAAAGCGCTACTTTGGAGGTGAAAAAATAGGGTTCACTGATGTTGCTACTGGATGGCTAGGATGCTGGGTTCGATTAGTGGAGGAAATTGTCGGCATAAACCTTATTGATACGAAGTCGATGGCTAAGCTTAATGCTTGGTTTGATGATTTTCTTGAGCATCCTATTATCAAAGAATGCATGCCACCTCGTGAGAAATTGTTGGAGCACAACAAGGCCTTCTACAAGGTTTTGAGATCATTATCAACTTGA 672 0.436 MASDSLTLIGFWGSPFALRVKWALELKGIQYQYVEEDLTNKSALLMQYNPVYKKVPVLVHQGKSLAESLVILEYIDETWKQNPLLPLDPYEKAKARFWSRFVDEKCVPAVMTTFSKGGVEQKKAAEEARENLKTLESGFEGKRYFGGEKIGFTDVATGWLGCWVRLVEEIVGINLIDTKSMAKLNAWFDDFLEHPIIKECMPPREKLLEHNKAFYKVLRSLST* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0878 223 PANTHER - 4 220 - -
Lan15g0878 223 Gene3D - 85 221 - -
Lan15g0878 223 SUPERFAMILY Thioredoxin-like 5 107 IPR036249 -
Lan15g0878 223 CDD GST_C_Tau 89 214 IPR045074 GO:0004364|GO:0006749
Lan15g0878 223 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 214 IPR010987 -
Lan15g0878 223 SFLD Glutathione Transferase (cytosolic) 2 218 IPR040079 -
Lan15g0878 223 Pfam Glutathione S-transferase, C-terminal domain 118 195 IPR004046 -
Lan15g0878 223 Gene3D Glutaredoxin 1 84 - -
Lan15g0878 223 CDD GST_N_Tau 6 79 - -
Lan15g0878 223 SFLD Main.3: Omega- and Tau-like 2 218 IPR045073 -
Lan15g0878 223 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Lan15g0878 223 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 220 IPR045073 -
Lan15g0878 223 SUPERFAMILY GST C-terminal domain-like 77 217 IPR036282 -
Lan15g0878 223 Pfam Glutathione S-transferase, N-terminal domain 5 77 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0878 Lan-Chr15 18068841 18070003 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0878 3 213 Glutathione S-transferase Gene Family AT2G29420 45.024 1.69e-71 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0878 K00799 - gmx:100813267 365.54