Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0869 ATGAATAAAATTCTACAAATGAGTATCCAAAAGGACCAAATCCAAAAGGAAAATGGTGCTCCTCCCACCAACAATAGTATTCTCATTCACACACTGTGGAAGTTTCATCGTGACTCCCATAACTGGCTTGCATTCTTTCTTCTCTTCATCCAAACCACACTGCTGGTTTCCGCTGAGCCGCTAGCGCCACTTCCAGGACCAATCACCACCAAAAAATCGATGGCAGGTGTTATGACAGTTGTGGCCATTTTGTTCATTATCTCAGGCTTACTTTCTCTATACACTCGCAATTGTTCCAATCGACGAACCCGAATCCGAGGCAGGCTCGACCTTGCTTTTCCAATCGGTAGCTCATGGCGTTCCAGAAGAGAACCATGTGGCCTGAACCCTGAAGTCATTGATAGCTTCCCTACTTTTCTCTACTCCAGCGTAAAAGATATCATGATTGTAAGAGAAACCCTTGCATGTGCAGTGTGCTTGGATGAGTTCAAAGATTCCGATACGTTGCGTTTAATCCCAACATGCAGCCACGTCTTCCACCCTTCTTGCATTGATGTATGGCTTGAATCTCACTCAACTTGCCCTGTTTGTCGCGCAAACCTCGTCCCAAAATCCGAGGATGCTTCATTTGTAACCATTGAGTTTCCAAATAACCAGGAACAACAACAGCAACGGCAACTGAATGATGCCGTTGGAGACGTTGTAGATGATGACGTGGAATACCCCAAGGAGAATCTGCTGAACCGAATACCTCGCTCACGTTCGACCGGGTTTTTATTTGATATGTTTCGACGGTCTGACTCGACCGGTCACTCGACGGTGATTGAACCGGGTGAGAATTGTGATAGGTTTACTCTGAGGTTACCAGATGAAATGAGAAAAAAGTTAGTGAACTCAACGCTGAAACGCACAAATAGTTGCATGAGTTTCAGGAGAATGAGCAGTGGGAGGAAGGGTTTTAGAACAAGAAGCATGGGTAGGAACTGTTTGCAGTGCCAGCACGAGCGGTTTTGCAGTGAAGAGGAGCATTGGGGTTTAACAATAACGACGCCGTTTTTTAATAAAAATAGTTCGGGTGATTCAGTGAGAAAATCACCTTCTGTTCAATGTTCAGAATGTTCAAATCATGTTTTTGTTGAGCGATCCTCTGATGGAATAAGCCCTGGACTCCATGCCTTTTAG 1182 0.4484 MNKILQMSIQKDQIQKENGAPPTNNSILIHTLWKFHRDSHNWLAFFLLFIQTTLLVSAEPLAPLPGPITTKKSMAGVMTVVAILFIISGLLSLYTRNCSNRRTRIRGRLDLAFPIGSSWRSRREPCGLNPEVIDSFPTFLYSSVKDIMIVRETLACAVCLDEFKDSDTLRLIPTCSHVFHPSCIDVWLESHSTCPVCRANLVPKSEDASFVTIEFPNNQEQQQQRQLNDAVGDVVDDDVEYPKENLLNRIPRSRSTGFLFDMFRRSDSTGHSTVIEPGENCDRFTLRLPDEMRKKLVNSTLKRTNSCMSFRRMSSGRKGFRTRSMGRNCLQCQHERFCSEEEHWGLTITTPFFNKNSSGDSVRKSPSVQCSECSNHVFVERSSDGISPGLHAF* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0869 393 PANTHER RING-H2 FINGER PROTEIN ATL11 68 314 - -
Lan15g0869 393 Pfam Ring finger domain 155 198 IPR001841 -
Lan15g0869 393 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 118 204 IPR013083 -
Lan15g0869 393 CDD RING-H2_PA-TM-RING 156 198 - -
Lan15g0869 393 SUPERFAMILY RING/U-box 136 204 - -
Lan15g0869 393 SMART ring_2 156 197 IPR001841 -
Lan15g0869 393 ProSiteProfiles Zinc finger RING-type profile. 156 198 IPR001841 -
Lan15g0869 393 PANTHER RING FINGER DOMAIN-CONTAINING 68 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0869 Lan-Chr15 17947200 17949009 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0869 43 319 Rapid Response to Elicitors AT3G05200 36.897 8.64e-49 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0869 K10664 - gmx:100814384 285.804