Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0856 ATGGATAAACTATGCTGTTTTAAGTCTTCCAACTCTCAGCTTGTAGAATCTCGTTCTTCATCCAGCACTGGTAAGGGGGAAAATCAAGAAGGGTCAATAAAGTATGGTTTCAGCCTAGTAAAAGGGAGAGCTAATCATCCAATGGAGGATTATCATGTTGCCAAGTTTGTGCAGATACATGATAAAGAATTGGGTTTGTTTGCTATTTATGATGGCCACTTAGGAGACCGTGTACCTGCATACTTACAGCAACATTTGTTTGCCAACATTTTAAAGGAGGATGAATTTTGGGATGATCCTACTCTGTCTATCTCAAAAGCATATGAGAGCACAGATCAAGCAATTCTATCACATAGTTCTGATTTGGGACATGGTGGTTCAACGGCTGTAACTGCTATATTGATCAGTGGGAGAAGTTTATGGATCGCTAACGTTGGAGATTCACGAGCTATTCTTTCGAGGAAAGGACAAGCAGTACAAATGACTACAGATCATGAGCCTAGCACGGAACGTGGTAGCATAGAGACTAGAGGTGGTTTTGTTTCCAACTTACCAGGTGATGTGCCTAGAGTAAATGGACAACTAGCTGTTTCTCGTGCATTCGGGGACAAGAGCCTCAAGTTACATTTGCGATCAGACCCTGATGTACAACATACTGATATAGATGTTGATACTGATAATTTAATCCTTGCAAGTGATGGACTTTGGAAGGTAATGACTAATCAAGAGGCAGTGGATATTACTAGAAGGATGAGAGACCCACAGAAAGCAGCTAAGCAATTAATAGCTGAAGCATTGAAAAGAGACAGTAAGGATGATATCTCTTGCGTTGTGGTGTCTCGCTGGTGCAGTTTATAG 858 0.4114 MDKLCCFKSSNSQLVESRSSSSTGKGENQEGSIKYGFSLVKGRANHPMEDYHVAKFVQIHDKELGLFAIYDGHLGDRVPAYLQQHLFANILKEDEFWDDPTLSISKAYESTDQAILSHSSDLGHGGSTAVTAILISGRSLWIANVGDSRAILSRKGQAVQMTTDHEPSTERGSIETRGGFVSNLPGDVPRVNGQLAVSRAFGDKSLKLHLRSDPDVQHTDIDVDTDNLILASDGLWKVMTNQEAVDITRRMRDPQKAAKQLIAEALKRDSKDDISCVVVSRWCSL* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0856 285 ProSiteProfiles PPM-type phosphatase domain profile. 34 281 IPR001932 -
Lan15g0856 285 PANTHER PROTEIN PHOSPHATASE 2C 1 280 IPR015655 GO:0004722|GO:0006470
Lan15g0856 285 MobiDBLite consensus disorder prediction 156 177 - -
Lan15g0856 285 SMART PP2C_SIG_2 45 281 IPR001932 -
Lan15g0856 285 Gene3D - 29 282 IPR036457 -
Lan15g0856 285 CDD PP2Cc 33 279 IPR001932 -
Lan15g0856 285 PANTHER PROTEIN PHOSPHATASE 2C 10-RELATED 1 280 - -
Lan15g0856 285 Pfam Protein phosphatase 2C 43 274 IPR001932 -
Lan15g0856 285 SUPERFAMILY PP2C-like 32 279 IPR036457 -
Lan15g0856 285 SMART PP2C_4 30 279 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0856 Lan-Chr15 17777716 17780468 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0856 1 279 PP2C-type Phosphatase Gene Family AT1G22280 72.632 5.31e-148 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0856 K17506 - gmx:100797292 496.508