Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0846 ATGATGACAAATCAGAATGTGGTGGCTCCTAATGATGTGAAGCTTTTGAACTTCAACACAATTTTTGTGATGGCAACTTCCATATCAAATTCAAACTCTAAACTGCAGTCAAATTCAGCAGTGCAGGAACCACTTGTCATGTTTGGTGGACTCTTGAGTCTGACTCAAAGAAATGTTAGGAAAAGGTTGGAGGGAAACAAAGTTCACAATTGGGTTGATTCAATCAGAGCTTCTTCTCCAACTCGTGCCAAATCTACTCTCCAGGCTTCAGAAAACCAAGACAAATTTTCTTGGAATCTGTATCACCCTTCAGCACTGGACATGTTTGATCAGATAATATCTAACTCGAAAGGAAAACAGATTGTAACTTTTCTTGACTATGATGGAACTCTCTCACCTATTGTTGCAGATCCAGAAAAAGCATACATGACTAGCAAGATGAAAGGGACACTAAAGGAAATAGCAAGACATTTTCCTACGGCCATCGTGACCGGAAGGTGCAGAGACAAGGTATATAATTTTGTAAGATTGGCAGAAGTGTATTACGCAGGAAGCCATGGCATGGACATAAAGGGCCCCCAACAAAACCGAAGTCCTAAGAAAGGTAATGATGGAAAAGCAGTGCTATTCCAACCTGCGAGTCAATTCCTGCCAATGATCAACGAGGTGTACAAGATTTTGCAAGAAATAACAAAATCTGTGCCAGGGGCTATGGTTGAGAACAACAAATTTTGTTTGTCCGTGCATTTCCGTTGTGTTGACGAAAAGAGTTGGGCACCATTGGCGGAGAAAGTTAAATTGGTGCTAAATGAGTACCCAAAACTTAAACTAACCCAAGGGAGAAAAGTCCTAGAGATTCGTCCAACCATCAAATGGGACAAGGGCAAGGCTATTGAATTCTTGTTGCATTCACTAGGATATGACAATTCTGATAATGTATTTCCAATCTATATCGGTGATGATCGAACTGACGAAGATGCTTTTAAGGTTTTGCGTAGTAGGGGTCAAGGGATTGGGATTCTTGTTTCTAGATTTCCAAAAGAAACAGATGCTTCTTACACATTGGAAGATCCATCACAGGTTGAGAAATTTTTGAGGCGCTTAGTGGAGTGGAAAAGATCAATCACTGTGACTCGCACTAGTGTATAG 1149 0.4064 MMTNQNVVAPNDVKLLNFNTIFVMATSISNSNSKLQSNSAVQEPLVMFGGLLSLTQRNVRKRLEGNKVHNWVDSIRASSPTRAKSTLQASENQDKFSWNLYHPSALDMFDQIISNSKGKQIVTFLDYDGTLSPIVADPEKAYMTSKMKGTLKEIARHFPTAIVTGRCRDKVYNFVRLAEVYYAGSHGMDIKGPQQNRSPKKGNDGKAVLFQPASQFLPMINEVYKILQEITKSVPGAMVENNKFCLSVHFRCVDEKSWAPLAEKVKLVLNEYPKLKLTQGRKVLEIRPTIKWDKGKAIEFLLHSLGYDNSDNVFPIYIGDDRTDEDAFKVLRSRGQGIGILVSRFPKETDASYTLEDPSQVEKFLRRLVEWKRSITVTRTSV* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0846 382 Gene3D - 124 355 IPR023214 -
Lan15g0846 382 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 29 375 - -
Lan15g0846 382 TIGRFAM T6PP: trehalose-phosphatase 119 369 IPR003337 GO:0003824|GO:0005992
Lan15g0846 382 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 29 375 IPR044651 GO:0004805|GO:0005992
Lan15g0846 382 CDD HAD_TPP 124 363 - -
Lan15g0846 382 Gene3D - 203 289 - -
Lan15g0846 382 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 124 333 IPR006379 -
Lan15g0846 382 Pfam Trehalose-phosphatase 124 359 IPR003337 GO:0003824|GO:0005992
Lan15g0846 382 SUPERFAMILY HAD-like 124 373 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0846 Lan-Chr15 17663489 17666130 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0846 117 368 Trehalose Biosynthesis Gene Families AT1G70290 26.471 4.02e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0846 K01087 - gmx:100788641 555.444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0846 15 17663489 17666130 Lan14g0647 14 13412721 13415199 LSH
Lan11g0472 11 3585278 3587904 Lan15g0846 15 17663489 17666130 PCT
Lan9g1114 9 18500014 18503282 Lan15g0846 15 17663489 17666130 PCT
Lan15g0846 15 17663489 17666130 Lan11g0472 11 3585278 3587904 PCT
Lan15g0846 15 17663489 17666130 Lan9g1114 9 18500014 18503282 PCT