Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0835 ATGTCTTCAATGGGCCTTCCTGCTACTGAAAATCTTCTTGAAACAAAAGAGATAAATGAGAGAAGTTTTTCTTCAGATGGTAAGGCACATCATCATATTTACAAAGTGGGAATTCCTCCAAAGCAGAACCTCTTCAAGGAATTCAAGGCAACCATAAAAGAAGCATTCTTTGCTGATGAGCCTCTAAGACACTTCAAAGATCAAACTAAGTTGCGAAAGCTCGTCCTCGGTATCGAGGCCATATTCCCCATACTTTCATGGTGTAGAACCTACAACCTTAAAAAATTTAGAGGTGATATCATATCAGGTCTAACTATTGCAAGTCTCTGCATCCCTCAGGATATTGGATATGCCAAGCTTGCAAATTTGGATCCACAATATGGACTATACTCCAGCTTTGTTCCACCACTGATTTATGCTATCATGGGAAGTTCTCGTGATATTGCTATTGGACCAGTGGCAGTGGTTTCTCTCTTGTTGGGGACATTACTTAGTGATGAGATTGATCCAACTAAGCATCGAGAAGAATATAGGAGACTTGCTTTTACAGCAACTTTTTTTGCTGGGATCACACAAGCAACACTTGGGATTTGTAGGTTAGGATTCTTGATTGACTTCCTATCTCATGCTGCTATTGTGGGTTTTATGGGTGGTGCTGCCATTACAATTGCCCTTCAACAACTTAAGGGTTTCCTCGGCATTAAAACCAAAAAATTCACAAAAAAAACTGATATTGTCTCTGTCATGAAATCAGTATTTAATACAGCCCATCATGGATGGAACTGGCAAACTATACTCATTGGAGCTAGCTTTTTGGGTTTTCTCCTAGTGGCAAAGTTTATTGGAAAGAAGAACAATAAATACTTCTGGGTGCCAGCAATTGCCCCGTTGATATCCGTTGTTCTGTCAACATTTTTTGTATTCATAACCCGCGCAGATAAGCATGGAGTGGATATTGTAAGACTCATAGAGAGAGGGATCAATCCTTCATCTGTTGACAAAATTTATTTTAGTGGTGACTACCTTAGCAAAGGTTTCAAAATTGGCGTGGTGGCAGGCATGGTAGCATTGACTGAAGCTGTGGCGATTGGAAGAACATTTGCGACTATGAAGGATTATCAATTAGATGGAAATAAAGAAATGGTGGCATTAGGAGCAATGAACGTTGTTGGTTCAATGACTTCTTGTTATGTGGCAACTGGTTCATTCTCTCGGTCGGCGGTGAATTTCATGGCTGGCTGCCAAACTGCAGTCTCAAATATTGTGATGTCCATAGTAGTGGTCTTAACCCTGTTTTTCATCACTCCACTTTTCCAATACACTCCAAATGCCATTCTTGCTGCAATCATCATTTCTGCTGTAATCGGCCTTATCGACTTTGAGGCAGCAATATTGATTTGGAAGATTGACAAATTTGATTTTATTGCTTGCATGGGAGCATTCTTTGGTGTTGTTTTTATCTCTGTTGAGATTGGACTTCTAATAGCTGTCTCAATATCCTTTGCAAAGATCTTACTACAGGTCACAAGGCCTAGGACTGCTACACTGGGTAAGATTCCTAGGACATCTGTCTATAGAAACACCCAACAATACCCAGAAGCTACTAAGATTCCAGGTGTACTGATTGTAAGAGTGGATTCTGCAATATATTTTTCCAACTCCAATTATGTTAAAGAAAGGATATTAAGATGGCTGATAGATGAAGAAGAACAAGTAAAAGGAGACTATCAAACAAAAGTCCAATTTTTGATAGTTGAAATGTCACCTGTGACTGACATAGACACCAGTGGCATCCATGCCCTTGAAGAGTTATATAGAAGTCTTCAGAAGAAAAGTATTGAGCTTATTCTTGCAAATCCTGGTCCAGTAGTGATAGACAAGCTTTACACATCAAATTTTGCAAACTTGATTGGTGAGGACAAGATCTTCCTAACTGTAGCAGATGCTGTTGCATACTGTTCTCCAAAGATGGCTGAAGATCCTTGA 1986 0.3958 MSSMGLPATENLLETKEINERSFSSDGKAHHHIYKVGIPPKQNLFKEFKATIKEAFFADEPLRHFKDQTKLRKLVLGIEAIFPILSWCRTYNLKKFRGDIISGLTIASLCIPQDIGYAKLANLDPQYGLYSSFVPPLIYAIMGSSRDIAIGPVAVVSLLLGTLLSDEIDPTKHREEYRRLAFTATFFAGITQATLGICRLGFLIDFLSHAAIVGFMGGAAITIALQQLKGFLGIKTKKFTKKTDIVSVMKSVFNTAHHGWNWQTILIGASFLGFLLVAKFIGKKNNKYFWVPAIAPLISVVLSTFFVFITRADKHGVDIVRLIERGINPSSVDKIYFSGDYLSKGFKIGVVAGMVALTEAVAIGRTFATMKDYQLDGNKEMVALGAMNVVGSMTSCYVATGSFSRSAVNFMAGCQTAVSNIVMSIVVVLTLFFITPLFQYTPNAILAAIIISAVIGLIDFEAAILIWKIDKFDFIACMGAFFGVVFISVEIGLLIAVSISFAKILLQVTRPRTATLGKIPRTSVYRNTQQYPEATKIPGVLIVRVDSAIYFSNSNYVKERILRWLIDEEEQVKGDYQTKVQFLIVEMSPVTDIDTSGIHALEELYRSLQKKSIELILANPGPVVIDKLYTSNFANLIGEDKIFLTVADAVAYCSPKMAEDP* 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0835 661 TIGRFAM sulP: sulfate permease 83 649 IPR001902 GO:0015301|GO:0016020|GO:0055085
Lan15g0835 661 ProSiteProfiles STAS domain profile. 530 653 IPR002645 -
Lan15g0835 661 CDD STAS_SulP_like_sulfate_transporter 531 646 - -
Lan15g0835 661 Pfam STAS domain 531 649 IPR002645 -
Lan15g0835 661 Gene3D STAS domain 510 657 IPR036513 -
Lan15g0835 661 PANTHER HIGH AFFINITY SULFATE TRANSPORTER TYPE 1 20 661 - -
Lan15g0835 661 PANTHER SULFATE TRANSPORTER 20 661 IPR001902 GO:0015301|GO:0016020|GO:0055085
Lan15g0835 661 Pfam Sulfate permease family 96 478 IPR011547 GO:0016021
Lan15g0835 661 ProSitePatterns SLC26A transporters signature. 125 146 IPR018045 GO:0008271|GO:0008272
Lan15g0835 661 SUPERFAMILY SpoIIaa-like 532 654 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0835 Lan-Chr15 17560244 17565722 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0835 1 660 Inorganic Solute Cotransporters AT1G22150 74.735 0.0 979
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0835 K17470 - gmx:100797668 1070.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g0914 2 19762554 19767292 Lan15g0835 15 17560244 17565722 PCT
Lan11g0480 11 3648727 3655153 Lan15g0835 15 17560244 17565722 PCT
Lan9g1108 9 18462171 18465762 Lan15g0835 15 17560244 17565722 PCT
Lan15g0835 15 17560244 17565722 Lan2g0914 2 19762554 19767292 PCT
Lan15g0835 15 17560244 17565722 Lan11g0480 11 3648727 3655153 PCT
Lan15g0835 15 17560244 17565722 Lan9g1108 9 18462171 18465762 PCT