Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0834 ATGACTTCAATGACTACTAATCAAACCAGAATGAGAGCCACTGACCAAGAACCCCTTGATTTTGAGGATACTACTCCTCAAACAGAAGGGTCACAGTCACACTGGGTGCTCAACTCTCCCAACCCACCATCTCTATGGAACAAGCTACTTACTTCAGTGAAGGACACCAAGTTCTTCTCTTCATCCAAGAAAAAAACTTGCCATGGTTATGCTCTTTCATTTTTGGAGAGTTTATTCCCAATCATTGGCTGGTGTACAAGTTACAAAGCTTCCAATTTCAAAGATGATTTATTTGCTGGTTTAACTCTTGCCAGCCTCAGCATACCTCAGAGCATAGGATATGCTAATTTAGCAAGACTTGATCCTCAATATGGATTGTATACCAGTGTTGTTCCTCCTTTTATATATGCTATGATGGGAAGTTCAAGAGAAGTTGCAATTGGACCTGTAGCTGTAGTGTCATTGCTGATATCCTCCCAGGTCTCAAAGGTGATTGATCCTTCTTCCAACCCTGATGCCTACAGAAATTTCGTCTTTACAGCGACCTTATTTGCAGGAATCTTTCAAGTTGCATTCGGAGTTTTCAGGTTGGGTTTTCTTGTGGATTTTCTTTCACATGCTGCTCTTGTAGGATTCATGGCTGGTGCAGCCATCATAATTGGTCTTCAGCAGCTCAAAGGGTTACTGGGGCTAAGTCACTTTACCTCCAACACTGATGTACCATCTGTGTTAGACTCTGTTTATAAGTCACTGCATCAACAAATTACATCAGAAGAAAAATGGTCCCCCCTGAATTTCATTATTGGGTGCTCATTCCTGATTTTCCTTTTACTTGCTCGGTTCATTGGCAGAAGAAACAGGAAACTTTTCTGGTTACCTGCTATTGCACCTCTTATATCAGTTGTATTAGCAACCTTAATTGTGTACTTATCAAAAGCTGATAAGCATGGAGTTAATATAATAAAGCATGTCAAAAGTGGTCTTAATCCAAGTTCAGTTCATCAGTTACAATTTCATGGCCAACATGTTGGACAAGCAGCTAAAATTGGATTGATTGCTGCTGTTATAGCTCTCACTGAAGCAATAGCGGTCGGTCGATCTTTTGCTTCCATTAAGGGATACCATCTTGATGGAAACAAAGAAATGTTAGCAATGGGTTGCATGAACATTGCTGGATCTTTAACTTCATGCTATGTGGCAACTGGTTCTTTCTCAAGGACAGCAGTAAATTTCAGTGCAGGATGTAAAACATCAATATCAAATATTGTGATGGGAGTTACTGTGATTTTGTGCCTGGAATTGTTTACAAGACTCTTATACTACACTCCTATGGCCATACTTGCTTCTATTATCCTCTCTGCACTACCTGGTTTAATTGATATAAATGAAGCTTGCTATATTTGGAAGGTTGACAAATTAGATTTTCTTGCATGTGCTGGTGCTTTCTTTGGTGTCTTGTTTAAATCAGTAGAGACTGGTCTTCTAGTTGCTGTGTCAATCTCATTTGCAAAGATACTGATACAATCAATTCGGCCAGGGATAGAAATTCTGGGAAGAGTTCCAAGAACAGATGCATTCTGTGATGTTGTTCAATATCCCATGGCAATAAGCACTCCAGGCATCTTAGTTATTCGAATAAGCTCTGGCTCACTATGCTTTGCAAATGCTAATTTTGTTAGAGAAAGAATACTAAAGTTGATCAAGAAAGAGGAAAATGACTTAAACGAGGCTGCTAAGGGAAGGGTCCAAGCAGTAATCTTAGACATGACCAACCTGATGAATGTTGACACTTCTGGAATTCTAGCACTGGAGGAACTGCACAAGAGGTTGCATACACGTGGCATAGAATTAGCTATGGTCAACCCAAGGTGGCTAGTAATTCACAAACTTAAACTAGCACACTTTGTGGAAAAAATAGGAAAAGAATTAGTTTTCCTTACAGTTTCTGAAGCTGTAGATGCATGCTTGGCTTCTAAGTTTTCCATCCCTTAA 1992 0.3966 MTSMTTNQTRMRATDQEPLDFEDTTPQTEGSQSHWVLNSPNPPSLWNKLLTSVKDTKFFSSSKKKTCHGYALSFLESLFPIIGWCTSYKASNFKDDLFAGLTLASLSIPQSIGYANLARLDPQYGLYTSVVPPFIYAMMGSSREVAIGPVAVVSLLISSQVSKVIDPSSNPDAYRNFVFTATLFAGIFQVAFGVFRLGFLVDFLSHAALVGFMAGAAIIIGLQQLKGLLGLSHFTSNTDVPSVLDSVYKSLHQQITSEEKWSPLNFIIGCSFLIFLLLARFIGRRNRKLFWLPAIAPLISVVLATLIVYLSKADKHGVNIIKHVKSGLNPSSVHQLQFHGQHVGQAAKIGLIAAVIALTEAIAVGRSFASIKGYHLDGNKEMLAMGCMNIAGSLTSCYVATGSFSRTAVNFSAGCKTSISNIVMGVTVILCLELFTRLLYYTPMAILASIILSALPGLIDINEACYIWKVDKLDFLACAGAFFGVLFKSVETGLLVAVSISFAKILIQSIRPGIEILGRVPRTDAFCDVVQYPMAISTPGILVIRISSGSLCFANANFVRERILKLIKKEENDLNEAAKGRVQAVILDMTNLMNVDTSGILALEELHKRLHTRGIELAMVNPRWLVIHKLKLAHFVEKIGKELVFLTVSEAVDACLASKFSIP* 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0834 663 CDD STAS_SulP_like_sulfate_transporter 532 648 - -
Lan15g0834 663 ProSitePatterns SLC26A transporters signature. 122 143 IPR018045 GO:0008271|GO:0008272
Lan15g0834 663 Pfam STAS domain 532 651 IPR002645 -
Lan15g0834 663 PANTHER SULFATE TRANSPORTER 26 660 IPR001902 GO:0015301|GO:0016020|GO:0055085
Lan15g0834 663 SUPERFAMILY SpoIIaa-like 537 655 IPR036513 -
Lan15g0834 663 ProSiteProfiles STAS domain profile. 548 655 IPR002645 -
Lan15g0834 663 PANTHER SLC26A/SULP TRANSPORTER-RELATED 26 660 - -
Lan15g0834 663 Gene3D STAS domain 511 658 IPR036513 -
Lan15g0834 663 MobiDBLite consensus disorder prediction 1 39 - -
Lan15g0834 663 Pfam Sulfate permease family 93 479 IPR011547 GO:0016021
Lan15g0834 663 TIGRFAM sulP: sulfate permease 80 651 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0834 Lan-Chr15 17538526 17544240 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0834 27 659 Inorganic Solute Cotransporters AT5G10180 63.906 0.0 832
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0834 K17469 - gmx:100805269 1043.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0834 15 17538526 17544240 Lan3g1575 3 27340988 27347428 LSH
Lan11g0481 11 3677579 3681472 Lan15g0834 15 17538526 17544240 PCT
Lan9g1107 9 18444225 18448285 Lan15g0834 15 17538526 17544240 PCT
Lan15g0834 15 17538526 17544240 Lan11g0481 11 3677579 3681472 PCT
Lan15g0834 15 17538526 17544240 Lan9g1107 9 18444225 18448285 PCT