Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0830 ATGGACATATATGAGCCATTCAAGCAAGTTAACATGTGGGGTGACAGCTTTAAAGTTGAAGGTGGCCTTAATTCAATTGCTTCACCAGTGTTACTATCTGAATATATTCCTCATGAAGCAAGGGAGCCTTGTGGAAATTATCAAGAGACTACTAGTACTAACAAAGATGTTAGTAAGGTGCTAAGACGCCTAGCTCAGAATCGCGAGGCTGCAAAGAAAAGTCGTCTGCGGAAAAAGGCTTATGTTCAACAATTAGAAACAAGCCGTTTGAAACTCATGCAATTGGAGTTGGAGATTGGAAAAACAAAAAAGCAGGGTATGTACATTGGTGGTGCATTAGATGCCAGTTATATGGGATCTCCTAGAACATTACAGTTGCAATCAGCAGGGATTGTTGCATTTGAAATTGAATATGGACATTGGGTTACAGAGCAACAGAGATGGAATGAAGAACTTAGAAATGCATTTCAAAACAATGCATCAAATGTTCAGCTCCATATACTTGTTCAGAGTGTCTTGAACCATTACTCAAATCTTTTCAGAATGAAAGTAGATGCTGCAAAGATTAATGTCTTCTATTTAATTTCTGGTGTATGGAAAGCATCGGTAGAGCGCATTTTCCTTTGGATCGGAGGATCTCGGCCGTCGCAACTTCTAAACATCATTGTACCCCAACTTGAGCCTTTGACTGATAAACAAATGGTTAGTATTAACAATCTCCGCTTGTCGTCTCAGCAAGCTGAAGATGCTCTTTCACAAGGACTGGATAAACTTCAGCAAAGTATGGTCCACAACATTGGAGTCGATGCATTAGGGGCAGCGAACTTCGAGTTTCAAATCGCTGATGCCATGGAGAAAATTGAAGCACTAGAAGGTTTTGTAAACCAGGCAGATCATCTGAGGCAACAAACTTTGCTTCACATGTCAAGGATCCTAACAACTCACCAAGCTGCTCAAGGATTGGTGGCATTAGGGGAATACTTACATCGTCTTCGCAATCTTAGTTCTCTTTGGGCGAATCGTTCGTGTGATTCTGCATAG 1041 0.4092 MDIYEPFKQVNMWGDSFKVEGGLNSIASPVLLSEYIPHEAREPCGNYQETTSTNKDVSKVLRRLAQNREAAKKSRLRKKAYVQQLETSRLKLMQLELEIGKTKKQGMYIGGALDASYMGSPRTLQLQSAGIVAFEIEYGHWVTEQQRWNEELRNAFQNNASNVQLHILVQSVLNHYSNLFRMKVDAAKINVFYLISGVWKASVERIFLWIGGSRPSQLLNIIVPQLEPLTDKQMVSINNLRLSSQQAEDALSQGLDKLQQSMVHNIGVDALGAANFEFQIADAMEKIEALEGFVNQADHLRQQTLLHMSRILTTHQAAQGLVALGEYLHRLRNLSSLWANRSCDSA* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0830 346 ProSiteProfiles DOG1 domain profile. 131 341 IPR025422 GO:0006351|GO:0043565
Lan15g0830 346 PANTHER TRANSCRIPTION FACTOR TGA9 1 342 - -
Lan15g0830 346 Pfam bZIP transcription factor 59 88 IPR004827 GO:0003700|GO:0006355
Lan15g0830 346 Coils Coil 78 105 - -
Lan15g0830 346 SMART brlzneu 55 115 IPR004827 GO:0003700|GO:0006355
Lan15g0830 346 SUPERFAMILY Leucine zipper domain 59 92 IPR046347 GO:0003700|GO:0006355
Lan15g0830 346 Gene3D - 58 107 - -
Lan15g0830 346 Pfam Seed dormancy control 150 223 IPR025422 GO:0006351|GO:0043565
Lan15g0830 346 PANTHER FACTOR TGA7, PUTATIVE-RELATED 1 342 - -
Lan15g0830 346 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 62 77 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0830 Lan-Chr15 17465302 17468669 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0830 1 341 Calmodulin-binding Proteins AT5G10030 51.576 2.10e-125 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lan15g0830 DOG1 2.3e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0830 K14431 - gmx:100794268 506.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0830 15 17465302 17468669 Lan3g1579 3 27417423 27421300 LSH
Lan11g0490 11 3765739 3768975 Lan15g0830 15 17465302 17468669 PCT
Lan15g0830 15 17465302 17468669 Lan11g0490 11 3765739 3768975 PCT