Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0824 ATGCTTTCGTTATTGTGTACGTTCTTGTTGCCGGCGATGAACGGTGGCCGATGTCACCGGCGGACTTACATGGAGGCTTTGGAACAATCCGCCGAGGAGACGTCGTGTCCGGGTTTGGCGGTGTTTCCGGCGGAGTTGCCGGAATTCGGAATGGATTTTTTCTCTCAGGCTAGGAAAGCGCTGAGTGAGCGTTCTCCTTTCGAAGTTGCTGAAGAAACGTCGACTTCTGCTGCGGCAGTTACTCTGCCGAGTGAGTTGGGTAATTTGTTGAACCGTCGCGGTGATAACCGTCGGCGCCACAAGAAGTCTTCTCACTCTGGTGCTGGTGAGAAGAAGAAGAAGTGTCGGGCCAATGAGAAGGCTTGTGGCTCCAACATTTGGACTGAGATGGAGGTATACTTCAGGGACTTGACATTGTCGGATATTGACACTTTGGCTGAGGCTACCTCGCTTTATAATTTAACTTATAGTGAATGTTTTTCGATTCCCCGTTTGGGGAATGCTCCCAAGTTTGATGTAGTTAGTACTGAGGATGAGAGAGTTGCTGCTCCAGCATTCAATTTAGTTAGTAGTGAGAATAATGAAAAAGTTGGTAGTGGGAATGAAAAAAATGCTGTCGAAGATGCAAATGGCGTGGATATGAAAATTGAGGATGGTTTTGTGGGAATTGAGTCAGTGGACAATGTTGCTGTCGAAAGAGATTTGCCTCAGGGTGACAAGACTCATGTTAGTTCTGATACCTGTTGTAGTTTAGAGTGGCTCTTAGGTTGTAGGAATAAGATTTCTTTAACTTCTGAGCACCCTTCGAAGAAATTGAAGCTTTTAGGTGGTGGTGCTGGTTTAGAGAAAGTTGTAATGGCTATTCCTTGTGATGAGGGGAAACGTTTTTGTGATTATTGCAGCAGGGGAGACACTGACAGTGATTCTAATCCATTAATAGTCTGTGCTTCATGTAAAGTTGTGGTTCATCAGAGGTGCTATGGTGTACAAGATAACATAGATGATTCTTGGTTGTGCTCCTGGTGTAAGCAAAAGGGTGATATTGATGACTCAGAGAATCCTTGTGTGCTTTGCCCGAAGAAGGGTGGCGCTTTAAAACCTGTTAATGGCAGTGTTGAAAGTGTTGGGTCTGTCCAGTTTGCACACTTGTTTTGTGGCCTGTGGATGCCTGAGGTTTATATAGATGATTTGAAGAAGATGGAGCCCATTATGAACGTGGGGGAAATCAATGAAAACAAGAGGAGATTAGTGTGTAATGTCTGCAAAGTGAAGTTCGGTGCATGTGTTCGGTGTAGCAATGGAGCTTGCGGGGCTTCTTTCCACCCGTTATGTGCAAGAGCAGCTAGGCATAGGATGGAAGTTTGGGCAAAGTATGGTGATGATGATGTAGAGTTGAGGGCTTTTTGCTTCAAACACTCAGATCTACAAGAGAACATAAACATCTCTCCCTCAGGAGACTCTGTTGCTATTGGTGAATTTTCTGAAGCCAATGACCCTCCAGTGACATTATCAGTGAACAGTGAACACAATTTGAAAGTTGGTATCCAGAATGGGGTAGTGTCTGATAGTAGTCCAGACAAGTTAAACCATAATGAACCACAAGATGGTGGATTGTCTGATTGTAGGCTAAGTGCTCATGACCTGTTGGGGTTTGGTGCTGGGGAGCAACACAATATTGGAGTAGTAGGGAGGACCAATGAGAATGCTGATGCATCTGAATCCCTCAGTTTTGCACTCGTTTTGAAGAAGTTGATAGATCGAGGAAAAGTTGATGCAGAAGATGTAGCATTGGAGATTGGCATTTCACCAGATGCATTAACAGAAAATATCAATGAAGCTTATATGGCCCCTGATGTGCGAGACAAAATAGTCAATTGGCTAAAAGCCCATGTATATACTACTGCATTTCAGAAAGGGGTAAAAGTCAAATTCAAACCAGGAAATGCATCTTCGGATGAGGGTGGATCTGCCCATGGTTCTGAGAGTTTACCAAAATCAAATTCAGGCTTGTTGGATCCTTTTGCTGTTAAGTCAGTCCCACCAAGGAGAAGAACTGTCAGCAACATTAGGATTTTGAAGGATAATAAAATGATATGTTTATCTGAGGGGGTTACTAGTGAGAATGGGATGCCAGTGGATAAGATCAGACTACGTCAGCCTGACCACGGAAATCCAGGAAGTTTGAACGAAGCATCCGTTCCTGATGCAACTGAAGTGAATTTAACCAAGTCTGAGGATTTTTGTCCTGCAGTTCAAGGCAATGCTGATAAACTCTTCAAATCCAGCATATCTGGATGCATTTTAGATGAAGAGTCCACTGTTTGTTTGCAGAATGCTTCTATGCTTTCCGAATGTCCTCTTATTCATCCTGCTTCAGAACCACCTGATTCTGGTTTAATAAAGAAGGAAACAATCTCTAATTATGTTCACCCATACATCAAAAAGAAGTTGCAGCAAGTTCATGATGGGGAGTCCTTGGAGGGCTTTATATGTCCAAGGGAGGAGGGAAATTCTGCGTATGAGTTCTCTGTGGCCAGTGATTGCTCAAGTAGCCGAAATCAGCAATTAACTTGCATTGACTTTTCCCAGCCCAATCAAGTGTATAAGGAGCAATTGGCTAGGGCTAAAAAAATGGAACTTCTGGAATTTTCTCCAGAAGATGAAGTTGAGGGGGAACTAATATATTACCAGCATAGATTATTCCAAGATAGAGTTGCAAAGAAGGGGCTAACTGATAACCTAATCCACAATATTGCCAAGAGTTTGCCACAGGAGATTGATATGTCACATCAGAGAAGATGGGATGCCGTGATTGTGAATCAATATCTGCGTGATCTTAAGGAGGCAAAAAAGCGGGGCAGGAAAGAAAGAAGGCATAAGGAAGCACAGGCAGTGCTGGCAGCTGCAACTGCTGCTGCTGCAGCATCTACTAGGAGTTCTTTCCGAAAAGACACCTTAGATGAATCTATGCAACAGGAGAATTTGGTGAAGTTGGATACTTTAAGTGGAAGGACTGGTGCTTCTTCTCAACCAATGCCACGAGCCAAAGAGACACTTTCTAGAGTAGCTGTGACTAGAACTTCGTCAGAGAAATATTCGGATTTTGGCATGTCAATCTCAAATTTCTCCAAGGAGCAGCCTAAATCATGCGATATCTGCAGACGACCTGAGACTATGTTGAACCCCATTATACTCTGCTCTGGTTGCAAGGTTGCAGTTCACTTGGATTGCTATCGTAGTGTGAAAGATACAGTGGGTCCATGGTACTGTGAATTATGTGAAAATTTATCATCTAGAAGCTCTGCAACATCTACCATCAATTCCCTGGAGAAGCCTTATTTTGTCGCAGAGTGTGCTCTCTGTGGTGGTACTACCGGAGCTTTTAGAAGGTCTTGTGATGGCCAATGGGTTCATGCTTTTTGTGCCGAGTGGGTTTTTGAGTCGACATTCAGAAGAGGACAAATAAATGCTGTTGAAGGAGTGGAAACTTTGTTGAAGGGAACTGACATTTGCTGCATCTGTTGCTGCAAGCATGGTGTATGCATGAAGTGTTGCTATGGCCATTGCCGAACCACATTCCATCCATACTGTGCAAGAAATGCTGGTTTGTACATGAATGTCAGGACTACTGGTGGCAAGCTGCAACACAAGGCTTACTGTCAAAGACATAGTTTGGAGCAGAAGGAAAAGGCCGAGACACAAAAACATGGAATTGAAGAGTTTAAAAGAATGAAGCAAATTAGGGTTGAACTTGAGAGATTACGTCTCCTCTGTGAAAGAATTGTCAAACGTGAAAAAATAAAGCGGGAGTTGATTATATGCTCCCATAACATGCTTGCCTTCAAAAGGGATCATGTTGCTAGGTCTATGCTGGTTCATAGCCCTTTCATACTTCCAGATGGCAGTTCAGAATCAGCTACAACATCCCTCAAAGGGAACACTGAGGGATACAGATCATGCAGTGAAGCTGTCCAACAATCAGATGATGTGACTGTGGACAGCTCAGTTTCTGCTAAGCACCGTGTCAGAGTTGCTGTATCCATGGACACAGACCCAAAAGTGGATGATGACTGCTCAACCTCACAAAGCCAATATAAGCACAAGATTCCGGAGAGGATGCAATTTTCTGGCAAGCAAATTCCCCGTAGAGCTTCTGCCACATTGCAATATCATTCAGATGAGGGTGGAAGGAGATCCAAATCTAGGAAGCATGCAGAGACATTCGGAAAAGAGCTTGTTATGACGTCGGATGAAGCATCTATGAAAAATTCAAGGTTACCTAAAGGATATGCATATGTTCCTGCTGATTGCTTGTCAAATGACAAGCACTCCAATGAGGATGTATATGCTAGTGAACCAGTGGAATGA 4368 0.4357 MLSLLCTFLLPAMNGGRCHRRTYMEALEQSAEETSCPGLAVFPAELPEFGMDFFSQARKALSERSPFEVAEETSTSAAAVTLPSELGNLLNRRGDNRRRHKKSSHSGAGEKKKKCRANEKACGSNIWTEMEVYFRDLTLSDIDTLAEATSLYNLTYSECFSIPRLGNAPKFDVVSTEDERVAAPAFNLVSSENNEKVGSGNEKNAVEDANGVDMKIEDGFVGIESVDNVAVERDLPQGDKTHVSSDTCCSLEWLLGCRNKISLTSEHPSKKLKLLGGGAGLEKVVMAIPCDEGKRFCDYCSRGDTDSDSNPLIVCASCKVVVHQRCYGVQDNIDDSWLCSWCKQKGDIDDSENPCVLCPKKGGALKPVNGSVESVGSVQFAHLFCGLWMPEVYIDDLKKMEPIMNVGEINENKRRLVCNVCKVKFGACVRCSNGACGASFHPLCARAARHRMEVWAKYGDDDVELRAFCFKHSDLQENINISPSGDSVAIGEFSEANDPPVTLSVNSEHNLKVGIQNGVVSDSSPDKLNHNEPQDGGLSDCRLSAHDLLGFGAGEQHNIGVVGRTNENADASESLSFALVLKKLIDRGKVDAEDVALEIGISPDALTENINEAYMAPDVRDKIVNWLKAHVYTTAFQKGVKVKFKPGNASSDEGGSAHGSESLPKSNSGLLDPFAVKSVPPRRRTVSNIRILKDNKMICLSEGVTSENGMPVDKIRLRQPDHGNPGSLNEASVPDATEVNLTKSEDFCPAVQGNADKLFKSSISGCILDEESTVCLQNASMLSECPLIHPASEPPDSGLIKKETISNYVHPYIKKKLQQVHDGESLEGFICPREEGNSAYEFSVASDCSSSRNQQLTCIDFSQPNQVYKEQLARAKKMELLEFSPEDEVEGELIYYQHRLFQDRVAKKGLTDNLIHNIAKSLPQEIDMSHQRRWDAVIVNQYLRDLKEAKKRGRKERRHKEAQAVLAAATAAAAASTRSSFRKDTLDESMQQENLVKLDTLSGRTGASSQPMPRAKETLSRVAVTRTSSEKYSDFGMSISNFSKEQPKSCDICRRPETMLNPIILCSGCKVAVHLDCYRSVKDTVGPWYCELCENLSSRSSATSTINSLEKPYFVAECALCGGTTGAFRRSCDGQWVHAFCAEWVFESTFRRGQINAVEGVETLLKGTDICCICCCKHGVCMKCCYGHCRTTFHPYCARNAGLYMNVRTTGGKLQHKAYCQRHSLEQKEKAETQKHGIEEFKRMKQIRVELERLRLLCERIVKREKIKRELIICSHNMLAFKRDHVARSMLVHSPFILPDGSSESATTSLKGNTEGYRSCSEAVQQSDDVTVDSSVSAKHRVRVAVSMDTDPKVDDDCSTSQSQYKHKIPERMQFSGKQIPRRASATLQYHSDEGGRRSKSRKHAETFGKELVMTSDEASMKNSRLPKGYAYVPADCLSNDKHSNEDVYASEPVE* 1456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0824 1455 MobiDBLite consensus disorder prediction 88 116 - -
Lan15g0824 1455 ProSitePatterns Zinc finger PHD-type signature. 1050 1093 IPR019786 -
Lan15g0824 1455 PANTHER PHD-FINGER DOMAIN CONTAINING PROTEIN FAMILY-RELATED 97 481 - -
Lan15g0824 1455 PANTHER PHD-FINGER DOMAIN CONTAINING PROTEIN FAMILY-RELATED 823 1448 - -
Lan15g0824 1455 MobiDBLite consensus disorder prediction 1002 1023 - -
Lan15g0824 1455 ProSiteProfiles Extended PHD (ePHD) domain profile. 1115 1224 IPR034732 -
Lan15g0824 1455 MobiDBLite consensus disorder prediction 1388 1408 - -
Lan15g0824 1455 Pfam PHD-finger 1061 1094 - -
Lan15g0824 1455 Pfam PHD-finger 310 343 - -
Lan15g0824 1455 CDD ePHD 1118 1223 - -
Lan15g0824 1455 Pfam PHD-zinc-finger like domain 354 472 - -
Lan15g0824 1455 Pfam PHD-zinc-finger like domain 1117 1223 - -
Lan15g0824 1455 ProSiteProfiles Zinc finger PHD-type profile. 1047 1096 IPR019787 -
Lan15g0824 1455 ProSitePatterns Zinc finger PHD-type signature. 297 342 IPR019786 -
Lan15g0824 1455 MobiDBLite consensus disorder prediction 1393 1408 - -
Lan15g0824 1455 MobiDBLite consensus disorder prediction 94 109 - -
Lan15g0824 1455 MobiDBLite consensus disorder prediction 647 668 - -
Lan15g0824 1455 Coils Coil 1244 1264 - -
Lan15g0824 1455 MobiDBLite consensus disorder prediction 653 667 - -
Lan15g0824 1455 MobiDBLite consensus disorder prediction 1435 1455 - -
Lan15g0824 1455 Coils Coil 943 963 - -
Lan15g0824 1455 PANTHER PHD FINGER PROTEINS 97 481 - -
Lan15g0824 1455 PANTHER PHD FINGER PROTEINS 823 1448 - -
Lan15g0824 1455 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1026 1107 IPR013083 -
Lan15g0824 1455 MobiDBLite consensus disorder prediction 1347 1362 - -
Lan15g0824 1455 SUPERFAMILY FYVE/PHD zinc finger 291 361 IPR011011 -
Lan15g0824 1455 ProSiteProfiles Extended PHD (ePHD) domain profile. 352 473 IPR034732 -
Lan15g0824 1455 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 289 348 IPR013083 -
Lan15g0824 1455 ProSiteProfiles Zinc finger PHD-type profile. 294 345 IPR019787 -
Lan15g0824 1455 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1115 1225 IPR013083 -
Lan15g0824 1455 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 349 475 IPR013083 -
Lan15g0824 1455 SUPERFAMILY FYVE/PHD zinc finger 1036 1095 IPR011011 -
Lan15g0824 1455 SMART PHD_3 296 343 IPR001965 -
Lan15g0824 1455 SMART PHD_3 1171 1224 IPR001965 -
Lan15g0824 1455 SMART PHD_3 417 473 IPR001965 -
Lan15g0824 1455 SMART PHD_3 1049 1094 IPR001965 -
Lan15g0824 1455 MobiDBLite consensus disorder prediction 1347 1366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0824 Lan-Chr15 17402220 17412878 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0824 255 445 C2H2 Transcription Factor Family AT3G14740 29.381 1.77e-17 84.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Lan15g0824 zf-HC5HC2H_2 2.6e-23 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0824 - - gmx:100775631 1935.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0824 15 17402220 17412878 Lan14g0628 14 13227851 13238083 LSH