Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0815 ATGTTGGGCTCTGCGTGGAATAAAGGCCCAAGAAGAAAATACGAAAGCAGAGTAGAGAAGGAGGTTGTGGAGTTGAAGGGAGCGTGTGGAATAGACATGGAGGAATTGCAGAGTGCTGTGGAGTGTTATAGTTTGAAAGTTTCCACTGTCCCAGAAAAGGGTCGCTCGCTTTTTGTTACCAGGGATTTCTATCCAGGGGAGGTGATTATATGTCAAGAGCCTTATGTTTGTGTACCAAATAACTCCTCTTCTCACCAAGTGAGGTGTGATGGATGTTTCACAGCAACTAACCTTAGGAAGTGCTCACGTTGTCATGTTGTATGGTATTGCGGATCCACATGTCAGAAATCAGAGTGGAAGTTGCATCGTCTTGAGTGTGAAGCCCTCTCGAGACTGGACAAGGATAAGAGACAGTCTGTCACACCATCCATACGACTCATGCTGAAACTTTATATTCGAAGGAAGTTGCAAAATGAGAAGATCATCCCAAACACTGCTATGGACAACTACAACTTGGTGCAGACACTAGTAGCTCACATGTCTGACATCACTGAGGAGCAGCTAGTGCTGTACGCACAGATGGCTAATCTTGTACACTTAATATTTCAGTGGCCTGAAATCAATATAAAAGAAATTGCAGAAAACTTTTCTAAGTTTGCATGCAATGCACATACCATTTCTGACAGTGAATTGAGACCTTTGGGAACAGGATTATACCCAGTTATTTCAATTATCAATCACAGCTGCTTGCCCAATTCTGTGTTGGTTTTTGAGGGAAGATCAGCATCTGTACGTGCTGTGCAACATGTACCCAAAGGTACTGAGGTACTCATAAGTTATATAGAGACTGCTGGAAGCACTATGACTCGACAGAAAGCTCTCAATGAGCAGTATCTATTCACTTGTACATGTCCACGCTGTTCTAAAGTGGGCCAGTATGATGATATTCAAGAAAGTGCGATTCTAGAAGGATACAGATGCAAAAATGAAAAATGTGATGGTTTCTTGATTCGTACAACTGATGGAAAGGAATTCCAATGCCAACATTGTGGACTAGCTAGGGACAAGGAAGAGATAAAGAAAATTGCAAATGAATTGAGATCGTTGTCAGAAGAAGAAGCTTCTAAGCTTTCTTCTACAGGCAATTATCAAGAAGCTATTTGCATATACAAAACTGTTGAGAAACTGCAAACAAAAATCTATCATCCTTTCTCAATATGGTTGATGCAAACTCGAGACAAGATTTTGAAGTCATTAATGGAGCTGGAACATTGGAGTGAAGCTTTAGCTTACTGCAAATTGACCATACCAGTCTATCAGAGAGTGTATCCAGCTGTTCACCCTCTGCTTGGTTTGCAATACTATACTTGTGGAAAACTCGAATGGTATCTGGGGGGGACAGAGGAAGCTGTTAAATCACTGACAAAGGCAGTGGATACACTAAGGATTACTCATGGCACAAATACACCTTTCATGAAGGAACTATTGATGAAGTTGGAAGAAGCTCGCGCCGAAGCTTCTTACAATTGGTCTTCGACAGAGAGGTAG 1548 0.4167 MLGSAWNKGPRRKYESRVEKEVVELKGACGIDMEELQSAVECYSLKVSTVPEKGRSLFVTRDFYPGEVIICQEPYVCVPNNSSSHQVRCDGCFTATNLRKCSRCHVVWYCGSTCQKSEWKLHRLECEALSRLDKDKRQSVTPSIRLMLKLYIRRKLQNEKIIPNTAMDNYNLVQTLVAHMSDITEEQLVLYAQMANLVHLIFQWPEINIKEIAENFSKFACNAHTISDSELRPLGTGLYPVISIINHSCLPNSVLVFEGRSASVRAVQHVPKGTEVLISYIETAGSTMTRQKALNEQYLFTCTCPRCSKVGQYDDIQESAILEGYRCKNEKCDGFLIRTTDGKEFQCQHCGLARDKEEIKKIANELRSLSEEEASKLSSTGNYQEAICIYKTVEKLQTKIYHPFSIWLMQTRDKILKSLMELEHWSEALAYCKLTIPVYQRVYPAVHPLLGLQYYTCGKLEWYLGGTEEAVKSLTKAVDTLRITHGTNTPFMKELLMKLEEARAEASYNWSSTER* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0815 515 SUPERFAMILY SET domain 44 280 IPR046341 -
Lan15g0815 515 Pfam SET domain 54 280 IPR001214 GO:0005515
Lan15g0815 515 ProSiteProfiles SET domain profile. 43 281 IPR001214 GO:0005515
Lan15g0815 515 Gene3D - 88 138 - -
Lan15g0815 515 SUPERFAMILY TPR-like 374 480 IPR011990 GO:0005515
Lan15g0815 515 Gene3D Tetratricopeptide repeat domain 435 511 IPR011990 GO:0005515
Lan15g0815 515 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SMYD 33 506 - -
Lan15g0815 515 Gene3D - 139 223 - -
Lan15g0815 515 Gene3D SET domain 56 307 IPR046341 -
Lan15g0815 515 Pfam MYND finger 89 126 IPR002893 -
Lan15g0815 515 ProSiteProfiles Zinc finger MYND-type profile. 89 126 IPR002893 -
Lan15g0815 515 Coils Coil 352 372 - -
Lan15g0815 515 SMART set_7 43 287 IPR001214 GO:0005515
Lan15g0815 515 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHR1 33 506 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lan15g0815 SET 8.2e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0815 K11426 - gmx:100789518 788.489