Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0813 ATGGATCATGATAACCCTAATTCCTCTTCTTCTTCCTCTTCCCATTCATCTCCACCTGGCCTCATTCGCCACTTTCAAGCCGCTTTGAAGCGCCACCGCCCTCTCGGTACAATGCAACAGTCTAATTCTTTGAAGCCGAAGCGTGTTCTTCTTCCGAAACGAAATGTATCTAAGGATGTGAACAAATCTCATGATATGGCTTCGAAGGAGTCAATTTCACATATTAACAATACCCCATCTGATTCTGATGCAACACCTCCATCTATTTTGACTTTTGATGAAGCTTCCAATCCATTTGTTACACAGGAACAACAATATCACGATAAACATGATGTGTATAACTTAAAAGACAACAACTTTAGTGTGCCTTCTATGCAGGTACAAAATGCTCACAAGAAAGTCAACTTCTCTATTCAAAATCACACTGCTCCCCATGGGGCCAATGATGGAAAGGCCACTGAGTTGGACAACTTATCATCTCATATGAGTTCACTTGGATTCACAGAAATGGACTGGGTTGAAAGCGGTCAACCTGAACCATCAATTGAAGAATCAAAGCTTCAAAAAATCCAGGAGGCAGAGCATGACACAAGTGTGAGAGCTGAGAGAGGAGTAAGTTCTATGTTGCCAAAGAGAACAGTTATTACTCAGGATCTTATGCAGGACTTCAGGAACTTTTTAGGTCATCCGGCAACGCAAAGTTCGGCGATGGGGACTTCATGTGCTACAACTACCTCAGTCAATTCATCTTCAGCTCCAATGCTAAACTCAGTATCCCATTATTCTCATTTGTATCTAGACAGTGGCTCTCAAGTGGCTGCAGAACCTTTGGGTGAGCCTAATGTTAATCCTCATCCCATAACTGAAGGGATTATGAAATCATCAAATAGTTCCCTAAAAGACACCAATAGAATGTCCGTTGATCAGGCACCAATTGCAGTACAAGGTTCTGGCTCTTCCGTTGATGCAGAGTTGGCATTTAAGGAGGGGGCTCCATCTAATGAGCAACAAGGGTGCAGTTCAAAAGAAACCAGCATTTCAAAATATACCTCTTATCATGATGACAAGTCAACTAAAGGGGAAGAACTTGCAGATGTTAACATCCAATCTCAGGCTCCAATGACCAAAACCTCATCTTCAGATGTGAAGTTGGAATCTTCCAAGTTAGAAAAGCGAGAGAAGACCACAAGTGGTAAAGGTTCGTCAGCCTCTCGGAGAAAGATATATGACCCTAATTTGTTTTTTGAAGTCAATGGCAAGCTTTATCAAAGGCTTGGTAAGATAGGTAGCGGTGGAAGCAGTGAGGTCCACAAAGTGATTTCATCAGACTGTAAGATCTATGCACTTAAAAAGATCAAGCTCAAAGGTCACGATTATGCTACTGCATTTGGGTTTTGTCAAGAGATCGAGTATCTAAATAGACTCAAAGGAAAGGATAATATCATACAGCTTACAGATTTTGAGGTTACTGACAAGGCTTTGCTTAAGGAGGTAATGAAAGGCTCCATCAGTAATAGGGGTTTAAATTATGATATTAGATATGTTGACATGAGAATTCGGGAATTAGGTCATTATTTCCCCAACCCACTACCTCCATTACATTCTTCATTGCTCCTCCATTACATTTTCCCTTGCTCCTCCATTACATTCTTCCTTGCTCCATCACTCCAAACAACAATCTTCTTAGACGACGATCTGCTTGGATGA 1707 0.413 MDHDNPNSSSSSSSHSSPPGLIRHFQAALKRHRPLGTMQQSNSLKPKRVLLPKRNVSKDVNKSHDMASKESISHINNTPSDSDATPPSILTFDEASNPFVTQEQQYHDKHDVYNLKDNNFSVPSMQVQNAHKKVNFSIQNHTAPHGANDGKATELDNLSSHMSSLGFTEMDWVESGQPEPSIEESKLQKIQEAEHDTSVRAERGVSSMLPKRTVITQDLMQDFRNFLGHPATQSSAMGTSCATTTSVNSSSAPMLNSVSHYSHLYLDSGSQVAAEPLGEPNVNPHPITEGIMKSSNSSLKDTNRMSVDQAPIAVQGSGSSVDAELAFKEGAPSNEQQGCSSKETSISKYTSYHDDKSTKGEELADVNIQSQAPMTKTSSSDVKLESSKLEKREKTTSGKGSSASRRKIYDPNLFFEVNGKLYQRLGKIGSGGSSEVHKVISSDCKIYALKKIKLKGHDYATAFGFCQEIEYLNRLKGKDNIIQLTDFEVTDKALLKEVMKGSISNRGLNYDIRYVDMRIRELGHYFPNPLPPLHSSLLLHYIFPCSSITFFLAPSLQTTIFLDDDLLG* 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0813 568 MobiDBLite consensus disorder prediction 1 20 - -
Lan15g0813 568 Pfam Protein kinase domain 422 507 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan15g0813 568 ProSitePatterns Protein kinases ATP-binding region signature. 428 450 IPR017441 GO:0005524
Lan15g0813 568 MobiDBLite consensus disorder prediction 70 88 - -
Lan15g0813 568 MobiDBLite consensus disorder prediction 363 382 - -
Lan15g0813 568 MobiDBLite consensus disorder prediction 383 400 - -
Lan15g0813 568 MobiDBLite consensus disorder prediction 1 88 - -
Lan15g0813 568 MobiDBLite consensus disorder prediction 348 362 - -
Lan15g0813 568 MobiDBLite consensus disorder prediction 52 69 - -
Lan15g0813 568 PANTHER DUAL SPECIFICITY PROTEIN KINASE TTK 7 492 IPR027084 GO:0004712|GO:0007093|GO:0051304
Lan15g0813 568 SUPERFAMILY Protein kinase-like (PK-like) 416 505 IPR011009 -
Lan15g0813 568 Gene3D Phosphorylase Kinase; domain 1 415 501 - -
Lan15g0813 568 MobiDBLite consensus disorder prediction 333 347 - -
Lan15g0813 568 PANTHER MIXED LINEAGE PROTEIN KINASE 7 492 - -
Lan15g0813 568 MobiDBLite consensus disorder prediction 330 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0813 Lan-Chr15 17283769 17286611 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TTK Lan15g0813 Pkinase 2.3e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0813 K08866 - gmx:100788990 497.664