Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0805 ATGGTTAAGAAAGAGCTTCAGATCCAGACAAAGCTATCATCAAAGGAAATGCCATCTTTGTCCCTATCATCAGATAGCATGAAGAAGAAATACAAGGGAGTTAGAATGAGGACTTGGGGTTCATGGGTATCAGAGATTAGAGCACCAAACCAAAAAACAAGAATATGGTTAGGTTCTTATTCAACAGCAGAAGCAGCAGCTAGAGCCTATGATGCTGCACTTCTATGCCTTAAAGGCTCCTCAGCAAATTTCAATTTTCCATTAACTTCTAATTCTTCACATTATATTTCTCATGATACTGTTATGTCACCTAAATCAATCCAAAGAGTTGCAGCAGCTGCAGCTAATAGTTTCATTGATGGCACTGCCATTGTTGTGAATACTCCACCTTCTCCTGATCTTCCAGCTTCATCTTATTCATCATCAGTGTCTTCTCCATCAATGGCTTCATCTCCCTCAGATCAAATCAATGATGATGTTTCACTAATATCATCTTTTGAATATGATCAACAAGAAAATGAGTCAATGGCTTTGCATATGATGGAACCTTGGTACACCTTTGATGGACTTAGTCCCTTCTTTGATATTGATTCATCTCAGATGCTTGAAGATTTATATGAAGAAAGTGACATTCGTTTGTGGAACTATTGCTGA 654 0.3792 MVKKELQIQTKLSSKEMPSLSLSSDSMKKKYKGVRMRTWGSWVSEIRAPNQKTRIWLGSYSTAEAAARAYDAALLCLKGSSANFNFPLTSNSSHYISHDTVMSPKSIQRVAAAAANSFIDGTAIVVNTPPSPDLPASSYSSSVSSPSMASSPSDQINDDVSLISSFEYDQQENESMALHMMEPWYTFDGLSPFFDIDSSQMLEDLYEESDIRLWNYC* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0805 217 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 11 217 - -
Lan15g0805 217 MobiDBLite consensus disorder prediction 135 155 - -
Lan15g0805 217 Pfam AP2 domain 30 79 IPR001471 GO:0003700|GO:0006355
Lan15g0805 217 ProSiteProfiles AP2/ERF domain profile. 30 87 IPR001471 GO:0003700|GO:0006355
Lan15g0805 217 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF014 11 217 - -
Lan15g0805 217 Gene3D AP2/ERF domain 29 89 IPR036955 GO:0003700|GO:0006355
Lan15g0805 217 CDD AP2 29 87 IPR001471 GO:0003700|GO:0006355
Lan15g0805 217 PRINTS Ethylene responsive element binding protein signature 31 42 IPR001471 GO:0003700|GO:0006355
Lan15g0805 217 PRINTS Ethylene responsive element binding protein signature 53 69 IPR001471 GO:0003700|GO:0006355
Lan15g0805 217 SMART rav1_2 30 93 IPR001471 GO:0003700|GO:0006355
Lan15g0805 217 SUPERFAMILY DNA-binding domain 30 88 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0805 Lan-Chr15 17212594 17213624 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0805 1 216 AP2-EREBP Transcription Factor Family AT1G21910 44.856 6.67e-52 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lan15g0805 AP2 4.3e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0805 - - pvu:PHAVU_009G123300g 246.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0805 15 17212594 17213624 Lan3g1587 3 27503420 27504364 LSH