Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0789 ATGGAGTTTGTGGATTCCAGAAAACTACAACTACAGCAACAACAACAACATTTCCATGTGTTGGCAGTGGATGATAGTGTCATTGATAGGAAGCTTTTGGAGAGGCTCCTTAGAGGTTCTTCATGCAAAGTTACATGCGTGGACTCTGGAGATAAGGCTTTGAAATATCTTGGCCTAATTGATGACCTTGCTAATACTATAGAATCATCATCTTCTCCTCCACCTCAACCATTACAAGAAGAGGGAACGAAAGTGAATTTGATAATGACAGACTATTGCATGCCTGGGATGAGTGGCTATGATTTGCTTAAACGAGTCAAGGAATCTTCTTGGAAAGATGTTCCAGTCGTGGTTATGTCATCAGAAAATATCCCTTCCAGAATCAGCATGTGTTTGGAAGAAGGGGCAGAAGAGTTTCTATTGAAGCCTCTTAAGTTATCAGATCTGAAGAAGCTCCAGCCATATTTTCTGAAATCCTTTGATAATTCTTATGAACAAGAATCTGTTAACAGTTCCATAGCTTCAGAAAATGACCACATCGTCAACAACAACAATAACATGAATAATAACAACATTAATAGTATTAGCAAAAGGAAGGCCATGTCTCCTGAACCTCCTGAGAGATCAAGACCCAAAATGAAAGGGTTGGAGGTGGCCTAA 660 0.3955 MEFVDSRKLQLQQQQQHFHVLAVDDSVIDRKLLERLLRGSSCKVTCVDSGDKALKYLGLIDDLANTIESSSSPPPQPLQEEGTKVNLIMTDYCMPGMSGYDLLKRVKESSWKDVPVVVMSSENIPSRISMCLEEGAEEFLLKPLKLSDLKKLQPYFLKSFDNSYEQESVNSSIASENDHIVNNNNNMNNNNINSISKRKAMSPEPPERSRPKMKGLEVA* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0789 219 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 218 IPR045279 GO:0009736
Lan15g0789 219 SMART REC_2 18 153 IPR001789 GO:0000160
Lan15g0789 219 PANTHER TWO-COMPONENT RESPONSE REGULATOR ORR4 9 218 - -
Lan15g0789 219 MobiDBLite consensus disorder prediction 178 198 - -
Lan15g0789 219 Gene3D - 19 193 - -
Lan15g0789 219 MobiDBLite consensus disorder prediction 201 219 - -
Lan15g0789 219 SUPERFAMILY CheY-like 18 158 IPR011006 -
Lan15g0789 219 ProSiteProfiles Response regulatory domain profile. 19 157 IPR001789 GO:0000160
Lan15g0789 219 CDD REC_typeA_ARR 20 152 - -
Lan15g0789 219 Pfam Response regulator receiver domain 20 151 IPR001789 GO:0000160
Lan15g0789 219 MobiDBLite consensus disorder prediction 178 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0789 Lan-Chr15 17045542 17049120 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0789 15 177 Response Regulator Gene Family AT3G57040 55.621 6.54e-61 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lan15g0789 Response_reg 9.4e-18 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0789 K14492 - gmx:100786187 322.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0789 15 17045542 17049120 Lan14g0598 14 12790604 12793525 LSH