Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0785 ATGGCAGATTCAAGGGTTGATACTGTTGCCAGATTAGCTCAATGGAAAGTCGACAACTTTGGACCTTGCTCCTACAAAAAATCTGACCCTTTTAAGGTCGGAATCTGGAACTGGTACTTATCTATAGAGAGGAACAGGTACCTATACATACATCTATTTCCAGAACCTTCTCGTATTTCTAAGGAGAACCCACCTGTTGCCAAGTTCATTCTTCGAGTTTTTAATGCCTCCTCTTCTCGCAAGTTGTATATTACTTCTGTTCATGAAAGGGTGCTTAGGACATATGATGACTTTGTCTGGCATGTTGATACTACATTTGTTGGCCGCTTCATTATTGATGTTGAATTTCTTGACCTGAAGATATGCCCTCTGAATGGCGGAGAAGCTAGTTCTGTATGGTCGTATGACGGAAAAATGCAAACTATTGCAGAACAAAGTACACTTAGTTGCCTCTCCTGCATGCTTGATGAGGCTATATATGCTGACCTAACCATTATCACTTCAGATGGTACATTGAGAGCTCACAAGGCAATTCTGTCTGCAAGTTCTCCTGTATTCCAGAGCATGTTTCATCACAACCTGAAGGAAAAAGAATCATCTACAATCCGTATAGAAGACATGTCACCTGAATCCTGCACGGTTCTCCTAAGTTATTTGTATGGAACAATCAAACAAGAAGATTTCTGGAAACACCGGCTCGCATTGCTTGGTGCGGCCAACAAATATGACATTGGTGGTCTCAAGGATTTATGTGAGGAAAGCTTACTGGAAGATCTTAACTCGGGAAATGTTCTCGAGAGGCTAAATGAGGCTTGGCTTTATCAACTACACAAGCTGAAGAAAGGGTGTTTGACCTTTCTATTTGAATTTGGTAAGATATATGATGTTAGAGATGAAATGAATAACTTTTTTCAGCATGCACATAGGGAACTAATGCTGGAGATGTTTCAGGAAGTGCTTGCAATTTGGAAACCAGTATAG 981 0.4057 MADSRVDTVARLAQWKVDNFGPCSYKKSDPFKVGIWNWYLSIERNRYLYIHLFPEPSRISKENPPVAKFILRVFNASSSRKLYITSVHERVLRTYDDFVWHVDTTFVGRFIIDVEFLDLKICPLNGGEASSVWSYDGKMQTIAEQSTLSCLSCMLDEAIYADLTIITSDGTLRAHKAILSASSPVFQSMFHHNLKEKESSTIRIEDMSPESCTVLLSYLYGTIKQEDFWKHRLALLGAANKYDIGGLKDLCEESLLEDLNSGNVLERLNEAWLYQLHKLKKGCLTFLFEFGKIYDVRDEMNNFFQHAHRELMLEMFQEVLAIWKPV* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0785 326 ProSiteProfiles BTB domain profile. 161 220 IPR000210 GO:0005515
Lan15g0785 326 SMART BTB_4 161 259 IPR000210 GO:0005515
Lan15g0785 326 PANTHER OS08G0495500 PROTEIN-RELATED 3 326 IPR044714 -
Lan15g0785 326 CDD MATH 15 101 IPR002083 GO:0005515
Lan15g0785 326 SUPERFAMILY POZ domain 145 257 IPR011333 -
Lan15g0785 326 CDD BTB_POZ_ZBTB_KLHL-like 160 242 - -
Lan15g0785 326 PANTHER BTB/POZ DOMAIN PLANT PROTEIN 3 326 - -
Lan15g0785 326 Pfam BTB/POZ domain 155 257 IPR000210 GO:0005515
Lan15g0785 326 Gene3D Potassium Channel Kv1.1; Chain A 134 288 IPR011333 -
Lan15g0785 326 SUPERFAMILY TRAF domain-like 14 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0785 Lan-Chr15 16981974 16990327 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Lan15g0785 BTB 3.4e-23 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0785 K10523 - rcu:8278000 548.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0785 15 16981974 16990327 Lan14g0594 14 12758478 12761838 LSH