Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0782 ATGTCAAACCACCAGCAGCAACAATCACTTGGAGGTAGTAACCGCATTGTTGCAGTCGATGTCACCCCTCCTAATAATCTTCATCATGATGCCTCTTCAAATCAACAGAAACAAGAACCTGTGTGGAGAAAGTTCATGGCATATGTTGGTCCTGGTTTCCTTGTCTCTTTGGCTTACCTTGATCCTGGAAATTTGGAAACTGATCTCCAAGCTGGAGCTCATCATAAATATGAGTTGTTGTGGGTAGTACTTATTGGATTGATCTTTGCACTTATAATTCAGTCACTGGCTGCAAATCTTGGTGTGTCAACTGGGAAACACCTTGCAGAAATATGTAAAGCTGAGTACCCATTACCTGTCATGTATTGTTTATGGCTATTTGCTGAGTTTGCAGTCATAGCTGCAGACATTCCTGAAGTAATTGGCACAGCCTTTGCACTGAACATACTATTCAAAATACCAGTATGGGCAGGAGTTCTTGTAACTGGCTGCAGCACTCTCTCACTACTTGGTCTGCAGAGATTTGGGATTAGGAAGTTGGAAATGTTGATATCAATCCTAGTTTTTGTGATGGCTGCATGTTTCTTTGGTGAAATGAGTTTCGTAAAACCCTCTGCTTCTGGTGTATTAAAGGGAATGTTTGTGCCCACACTCAGTGGTACTGCAGCCACAGGCGATGCCATTGCTCTTTTGGGTGCTCTTGTTATGCCGCACAACCTCTTCCTCCACTCTGCTCTTGTGCTCACTAGAAAAGTACCAACTACCGTTCGTGGCATCAATGATGCATGCAGATACTTACTCATAGAGAGTGGGTTTGCATTGTTTGTGGCATTTCTAATCAATGTTGCAGTAATTTCTGTATCCGGAAGCATTTGTTCAGCCAACAACCTTTCTGCAGAGGATGCTCAACATTGTAGCAATCTTACCCTTCACAATGCTACATTTCTTCTCAAGAATGTGTTGGGACGGTCCAGTTCAACTGTTTATGCCATAGCATTGTTAGCCTCAGGACAAAGCTCTGCCATCACTGGAACCTATGCAGGACAATTCATCATGCAGGGTTTTCTGGACTTAAAGATGAAAACATGGATCAGGAACTTGGTGACTAGGTGCATTGCCATAACACCTAGTCTTATTGTTTCCATCATTGGTGGACCTTCTGGGGCTGGTCGACTCATTGTTATTGCATCGATGATACTTTCTTTTGAGTTGCCATTCGCTTTAATTCCGCTCCTTAAGTTTAGCAGCAGCAGTGATAAAATGGGACCTCACAAGAATTCTATCATTATCATTGTCATCTCATGGATCCTAGGCTATGGGATTATTTGTATCAATGTTTACTACCTTAGTACAGCTTTCGTGGGTTGGTTGATTCATAGCAGTCTACCAAAGGTGGCAAATGTGTTCATTGGAATTATAGTATTTCCTCTAATGATAGTCTACATTGGCTCAGTTATCTACCTAACCTTCAGAAAAGATACTGTTAAGACATTTATTGAGACAAAGGATGACCCAAGAATAGATGATCAATTAGAGTTAAGCCTTGAACCATATAGAGAAGATTTAATTCATAAACCATTGCCATAA 1587 0.4134 MSNHQQQQSLGGSNRIVAVDVTPPNNLHHDASSNQQKQEPVWRKFMAYVGPGFLVSLAYLDPGNLETDLQAGAHHKYELLWVVLIGLIFALIIQSLAANLGVSTGKHLAEICKAEYPLPVMYCLWLFAEFAVIAADIPEVIGTAFALNILFKIPVWAGVLVTGCSTLSLLGLQRFGIRKLEMLISILVFVMAACFFGEMSFVKPSASGVLKGMFVPTLSGTAATGDAIALLGALVMPHNLFLHSALVLTRKVPTTVRGINDACRYLLIESGFALFVAFLINVAVISVSGSICSANNLSAEDAQHCSNLTLHNATFLLKNVLGRSSSTVYAIALLASGQSSAITGTYAGQFIMQGFLDLKMKTWIRNLVTRCIAITPSLIVSIIGGPSGAGRLIVIASMILSFELPFALIPLLKFSSSSDKMGPHKNSIIIIVISWILGYGIICINVYYLSTAFVGWLIHSSLPKVANVFIGIIVFPLMIVYIGSVIYLTFRKDTVKTFIETKDDPRIDDQLELSLEPYREDLIHKPLP* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0782 528 Hamap Divalent metal cation transporter MntH [mntH]. 32 453 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lan15g0782 528 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 35 527 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lan15g0782 528 PANTHER METAL TRANSPORTER NRAMP5 35 527 - -
Lan15g0782 528 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 43 419 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lan15g0782 528 Pfam Natural resistance-associated macrophage protein 66 427 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lan15g0782 528 PRINTS Natural resistance-associated macrophage protein signature 124 150 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lan15g0782 528 PRINTS Natural resistance-associated macrophage protein signature 152 171 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lan15g0782 528 PRINTS Natural resistance-associated macrophage protein signature 177 198 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lan15g0782 528 PRINTS Natural resistance-associated macrophage protein signature 227 250 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lan15g0782 528 PRINTS Natural resistance-associated macrophage protein signature 337 356 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lan15g0782 528 PRINTS Natural resistance-associated macrophage protein signature 365 382 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lan15g0782 528 PRINTS Natural resistance-associated macrophage protein signature 397 416 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0782 Lan-Chr15 16947218 16954771 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0782 2 528 Inorganic Solute Cotransporters AT1G80830 57.845 0.0 607
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0782 K21398 - gmx:100787785 850.121