Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0779 ATGTTTACCCGAACCAGGAATTTCTCATCGTCGTCGCCGTCTTCTTCATCCTCGGAGAAGAAGAAGGTCACTGCCGCGAAGAAATCTCAAACGACAAAGAAGCGTCCTGCTCTCACCGACGTAACCAATAAGAGAAATGCCTCTCTCTGCGGTGCAAGGAATTTCGTTGCTCCTTCATCCATTCCTTTGGTTCCATGCACGTCTAAAGCTGCCAAGACAAAGAAGGACTCAATTGGCAGTTCTCAGAAGGATTCTATTGTGAGTTCTCGGAGAAAGGATTCTATTACAAGTTCTCAGAGAAAGGATTCTATTGCAAGTTCTCAGAGAAAGGATTCTATTGCAAGTTCTCAGAAAAATAATTCTATTGCCAGTTCTCAGAAAAAGGATTCTATTGCCACTTCTCAGAAAAAAGTTATGTCCGGGGACACTTTGCCAGCCTCATTGAGCACGAAATCAAGTGGGTTTGTGCTTTCTGAACGCACATGTTCAACCAAAAGTAGCCAACTTAAGGCTGTAGTTCAACCTTTCCTTGCTAATATGGCATGTGCTTCAAGAAGGAAGAGCCTTTCTCCAAGGAGAGTATACAGTGGTGATACCGTCGTGAAGACAGAAGAAACAAATGAAGTTGTGGATATCGACAACAATATCAAGGACCCACAATTCTGTGCGTCAATTGCCCATGAAATCTATGAACATTTGCGTGCACGTGAGGAAATTAGAAGGCCATCTATGGATTTTATGGAAAAAACACAGAAAGATATTGATGCTAGCATGCGGGCAGTACTTATTGATTGGCTTGTGGAGGTTTCTGAAGAGTACAGGCTTGTACCTGATACACTATTTTTGACAGTTAACTACGTGGATCGCTATCTTTCTAGCCATTCAATTAATAGGAAGCAATTACAGCTACTTGGTGTTGCCTGCATGAGGATTGCTGCCAAATACGAGGAGATCTGTGCCCCTGAGGTGCAAGAGTTTTGTGATATAACTGATAATACATATTCCAAGGAGCAGGTTTTGCAGATGGAATTTGCTGTACTGAATTCCTTGAAGTTTGAAATGACAGCCCCAACAGTTAATTGTTTTTTGAGGCGCTTCATTATTGTTGCCCAACGCACTTGTGAGGTTCCTGCACTGCATTTGGAGTATTTGGCAGCCTATCTCGCAGAGCTATCTCTTCTAGAGTATGCTATGCTGAAGTACACCCCATCACTAGTTGCTGCATCAGCCACTTTTTTGGCTACATACATTCTACTTCTTCCTAGGAAGAAACCTTGGAATTCTACACTAAGGTATTACACAGGCTACCAAGCACCCGAACTGCAGGAATGTGTCATGGTATTGCATTGGGTGTGCTGCAATGGCTATCATGCATTGCCTGCCATCAGGGAGAAATACAGTCAGCATAAGTTCAAGTTCGTAGCAAAGAAGTACTGTCCTCTATCAATACCTCCAGAGGTGTTCCAGAACTAG 1473 0.4304 MFTRTRNFSSSSPSSSSSEKKKVTAAKKSQTTKKRPALTDVTNKRNASLCGARNFVAPSSIPLVPCTSKAAKTKKDSIGSSQKDSIVSSRRKDSITSSQRKDSIASSQRKDSIASSQKNNSIASSQKKDSIATSQKKVMSGDTLPASLSTKSSGFVLSERTCSTKSSQLKAVVQPFLANMACASRRKSLSPRRVYSGDTVVKTEETNEVVDIDNNIKDPQFCASIAHEIYEHLRAREEIRRPSMDFMEKTQKDIDASMRAVLIDWLVEVSEEYRLVPDTLFLTVNYVDRYLSSHSINRKQLQLLGVACMRIAAKYEEICAPEVQEFCDITDNTYSKEQVLQMEFAVLNSLKFEMTAPTVNCFLRRFIIVAQRTCEVPALHLEYLAAYLAELSLLEYAMLKYTPSLVAASATFLATYILLLPRKKPWNSTLRYYTGYQAPELQECVMVLHWVCCNGYHALPAIREKYSQHKFKFVAKKYCPLSIPPEVFQN* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0779 490 Gene3D - 228 476 - -
Lan15g0779 490 Pfam Cyclin, C-terminal domain 357 476 IPR004367 -
Lan15g0779 490 MobiDBLite consensus disorder prediction 1 20 - -
Lan15g0779 490 SUPERFAMILY Cyclin-like 357 480 IPR036915 -
Lan15g0779 490 PANTHER CYCLINS 23 489 IPR039361 -
Lan15g0779 490 PIRSF Cyclin_A_B_D_E 2 487 IPR039361 -
Lan15g0779 490 Pfam Cyclin, N-terminal domain 228 354 IPR006671 -
Lan15g0779 490 MobiDBLite consensus disorder prediction 69 145 - -
Lan15g0779 490 CDD CYCLIN 355 449 IPR013763 -
Lan15g0779 490 SUPERFAMILY Cyclin-like 217 354 IPR036915 -
Lan15g0779 490 MobiDBLite consensus disorder prediction 99 145 - -
Lan15g0779 490 ProSitePatterns Cyclins signature. 259 290 IPR006671 -
Lan15g0779 490 SMART Cyclin_C_2 357 480 IPR004367 -
Lan15g0779 490 SMART cyclin_7 361 450 IPR013763 -
Lan15g0779 490 SMART cyclin_7 264 348 IPR013763 -
Lan15g0779 490 CDD CYCLIN 258 347 IPR013763 -
Lan15g0779 490 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 23 489 - -
Lan15g0779 490 Gene3D - 242 355 - -
Lan15g0779 490 MobiDBLite consensus disorder prediction 1 54 - -
Lan15g0779 490 MobiDBLite consensus disorder prediction 30 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0779 Lan-Chr15 16895531 16901550 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0779 12 490 Core Cell Cycle Gene Families AT1G44110 46.327 2.92e-135 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0779 K06627 - qsu:112028128 451.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0779 15 16895531 16901550 Lan14g0592 14 12719659 12723364 LSH