Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0778 ATGAATCGTGGTTCATCATTTTCTTCTTCAACTACATCATCATTGGCGAAGCGTCATGCATCTGTGTCCAACTCAGAGAAGATTAAGAAGCGGCCTCCTCTTACTAATCTCACTAATCACATTTCTTCTCTCAACTCATCACCCACTTTGGTAACTTGTGCTACTAAAGTTTCCAAGGCAAAGAAAGAGCCTCCACCATGCACCACTAGCTCAGCAATTTCTGACAATACACTACTACCCTCTTTGCCAAATCTTAAATCTAATATAGCTGTTTTTCCTTCTGTTTCAATCAGCAGCATGGATAGTTCTCCAATTAAATCAGATGGGATGTCAGTTTCTATAGATGAGTCAATGTCTTCTAGTCATTCTTTCAAGAGTCCTGATATTGAGTATCTTGACAACACTGATCTTTCAGCTGTTGATTCAATTGATAGAAAGACATTCACCAATCTCAACATCTCTGATACTACAGAACCAGAAGGCAATACCTGTAGTAGAGACACACTTGTTGAGTTGGAAAAAGATGACAAAATTGTCAATGTTGATAACAATTACAAGGATCCTCAGCTTTGTGCAACTTTTGCTTGTGATATCTACAAGCACCTGCGTGCATCTGAGGTAAAGAAAAGGCCATCCACAGACTTCATGGAGAAAATCCAGAAGGACTTAAAACCCAGCATGCGTGCTATATTGATTGATTGGCTTGTTGAGGTGGCTGAAGAATATAGACTTGTACCTGATACATTGTATTTGACAGTAAACTACATAGACCGGTATCTTTCAGCGAATGTGATGAATCGACAAAGGTTACAATTACTTGGTGTTGCCTCCATGATGATTGCCTCTAAATATGAAGAGATCTGTGCACCTCAGGTGGAGGAATTTTGTTACATAACTGATAACACATACTTCAAACATGAGGTTTTGGAGATGGAATCAGCTGTCTTGAACTTTCTGAAGTTTGAAATGACAGCTCCAACAATTAAATGTTTCTTAAGACGATTTGTTCGTGCAGCTCAAGGAGTCACCGAGGCCCCTTCATTACAACTAGAGTGCTTGACAAACTATATAGCGGAACTGTCTCTCTTGGAGTACAGTATGCTTCGATATGCTCCATCACTTATAGCCGCTTCTGCAATTTTCCTGGCAAAATTTATACTTTTCCCTTCAATGAACCCTTGGAATTCCACATTGCAGCATTACACACTATACCACCCTTTTGAATTGTGTGATTGTGTAAGGGATCTCCATCGTCTTTTTTGCTGCAGCCCGAATTCCGATTTGCTTGCAATTAGGGAGAAATACAATCAGCACAAGTACAAATATGTGGCCAAGAAGTACTGCCCTCCTTCAATACCTCCAGAATATTTCCAGAATTGA 1380 0.3978 MNRGSSFSSSTTSSLAKRHASVSNSEKIKKRPPLTNLTNHISSLNSSPTLVTCATKVSKAKKEPPPCTTSSAISDNTLLPSLPNLKSNIAVFPSVSISSMDSSPIKSDGMSVSIDESMSSSHSFKSPDIEYLDNTDLSAVDSIDRKTFTNLNISDTTEPEGNTCSRDTLVELEKDDKIVNVDNNYKDPQLCATFACDIYKHLRASEVKKRPSTDFMEKIQKDLKPSMRAILIDWLVEVAEEYRLVPDTLYLTVNYIDRYLSANVMNRQRLQLLGVASMMIASKYEEICAPQVEEFCYITDNTYFKHEVLEMESAVLNFLKFEMTAPTIKCFLRRFVRAAQGVTEAPSLQLECLTNYIAELSLLEYSMLRYAPSLIAASAIFLAKFILFPSMNPWNSTLQHYTLYHPFELCDCVRDLHRLFCCSPNSDLLAIREKYNQHKYKYVAKKYCPPSIPPEYFQN* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0778 459 CDD CYCLIN 227 316 IPR013763 -
Lan15g0778 459 SUPERFAMILY Cyclin-like 326 451 IPR036915 -
Lan15g0778 459 SMART cyclin_7 330 418 IPR013763 -
Lan15g0778 459 SMART cyclin_7 233 317 IPR013763 -
Lan15g0778 459 Pfam Cyclin, C-terminal domain 326 445 IPR004367 -
Lan15g0778 459 PANTHER CYCLIN-A1-1 70 458 - -
Lan15g0778 459 PANTHER CYCLINS 70 458 IPR039361 -
Lan15g0778 459 SUPERFAMILY Cyclin-like 186 323 IPR036915 -
Lan15g0778 459 MobiDBLite consensus disorder prediction 1 41 - -
Lan15g0778 459 SMART Cyclin_C_2 326 449 IPR004367 -
Lan15g0778 459 Gene3D - 197 445 - -
Lan15g0778 459 MobiDBLite consensus disorder prediction 1 21 - -
Lan15g0778 459 Pfam Cyclin, N-terminal domain 197 323 IPR006671 -
Lan15g0778 459 PIRSF Cyclin_A_B_D_E 2 455 IPR039361 -
Lan15g0778 459 ProSitePatterns Cyclins signature. 228 259 IPR006671 -
Lan15g0778 459 CDD CYCLIN 324 417 IPR013763 -
Lan15g0778 459 Gene3D - 211 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0778 Lan-Chr15 16881684 16885561 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0778 2 459 Core Cell Cycle Gene Families AT1G44110 63.034 0.0 552
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0778 K06627 - gmx:100789565 674.47