Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0734 ATGGGAAGGTGTTGGTTTTTTGGGGTGTTGGCTGTGGTAGGGTGTGCATGTTTGGTTGGTAATGTTGTAGGGTACCCTAGAGAGGATCTGGTGGAGAAGCTACCTGGCCAACCCCATGTTGGGTTTAAACAGTATGCTGGGTATATTGACATAGATGTCAAAACTGGGAAGAGTTTGTTCTACTATTTTGTAGAAGCTGAACATCGCCCTCACAAAAAGGCCCTTACTCTTTGGCTCAATGGAGGGCCTGGATGTTCCTCCATTGGAGGTGGTGCCTTTTCTGAATTGGGTCCCTTTTATCCTAGTGGTGATGGACGTGGTCTCCGAATAAATTCAAGGTCTTGGAATAAAGCATCCAACCTACTCTTTGTTGAGTCTCCTGCTGGAGTTGGTTGGTCATATTCAAATACCACTTCAGATTACAACGCTGGAGATGCGTCTAGTGCCAATGACATGCTTGTGTTCTTCCTAAAATGGTACAAAAAGTTTCCATCCTACAAATCAAGGAAGTTGTTCCTCACTGGAGAAAGCTACGCAGGACATTATATACCACAATTGGCTGATGCTATTCTAAACTATAATGCCAAATCAACTGGTTTCAAATTCAATATCAAAGGACTGGCTATTGGAAACCCACTTCTGAAACTTGGCAGTAATGACCAAGCAAGATATGAATACTACTGGTCACATGGATTGATTTCCGATGAACTTGGTCTAACCATAAAGAAGGAGTGTAAATTTGATGATAATGTCTCTGGAGGTATACTCAATATATCTATATCATGCGTTGATGCTATGTCTGAAGCAAGTAAATCTGTTGGCGATTATATAAACGAGTATGATGTCATTCTGGATGTTTGTTATCCAGCTATTGCTGAACAACAACTGAGATTGCATAAGACGATTACCAAAATAAGTGTAGGTGTAGATGTATGTATTTCTCGTGAAAAAGACTTTTACTTAAACCTTCCTGAGGTTCAGAAGGCTCTTCATGCAAATCGTACAAATCTTCCTTATAAATGGAGTGGATGTAGTGATGTTTTAAATTATAGCCATACAGATCCTAGCATCAATATCGTTCCAATTCTCAAAAGGATAGTTCAAAACCACATTCCAGTGTGGATTTTCAGTGGAGACCAAGATGCTGTTGTACCATTACTGGGTACTCGAACACTCATTCGTGAACTAGCTCAGGAACTCAACTTCAACATTACAGTTCCTTACGGAGCTTGGTTCCACAACGGCCAGGTTGGAGGATGGGCAATAGAGTATGGAAATATTTTGACTTTTGCTACTGTAAGAGGAGCTGGTCATATGGTACCTTATGCACAACCTTCAAGATCACTCCATCTATTCAGTGATTTTGTGCTTGGAAGGAGGTTGCCAAATGCAACTCGTCCTTCAATTGATGGTTAA 1416 0.4089 MGRCWFFGVLAVVGCACLVGNVVGYPREDLVEKLPGQPHVGFKQYAGYIDIDVKTGKSLFYYFVEAEHRPHKKALTLWLNGGPGCSSIGGGAFSELGPFYPSGDGRGLRINSRSWNKASNLLFVESPAGVGWSYSNTTSDYNAGDASSANDMLVFFLKWYKKFPSYKSRKLFLTGESYAGHYIPQLADAILNYNAKSTGFKFNIKGLAIGNPLLKLGSNDQARYEYYWSHGLISDELGLTIKKECKFDDNVSGGILNISISCVDAMSEASKSVGDYINEYDVILDVCYPAIAEQQLRLHKTITKISVGVDVCISREKDFYLNLPEVQKALHANRTNLPYKWSGCSDVLNYSHTDPSINIVPILKRIVQNHIPVWIFSGDQDAVVPLLGTRTLIRELAQELNFNITVPYGAWFHNGQVGGWAIEYGNILTFATVRGAGHMVPYAQPSRSLHLFSDFVLGRRLPNATRPSIDG* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0734 471 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 15 - -
Lan15g0734 471 Gene3D alpha/beta hydrolase 26 288 IPR029058 -
Lan15g0734 471 ProSitePatterns Serine carboxypeptidases, serine active site. 173 180 IPR018202 GO:0004185
Lan15g0734 471 ProSitePatterns Serine carboxypeptidases, histidine active site. 428 445 IPR033124 GO:0004185
Lan15g0734 471 PANTHER CARBOXYPEPTIDASE 6 465 - -
Lan15g0734 471 Gene3D - 359 458 - -
Lan15g0734 471 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 6 465 IPR001563 GO:0004185|GO:0006508
Lan15g0734 471 SUPERFAMILY alpha/beta-Hydrolases 32 460 IPR029058 -
Lan15g0734 471 PRINTS Carboxypeptidase C serine protease (S10) family signature 111 123 IPR001563 GO:0004185|GO:0006508
Lan15g0734 471 PRINTS Carboxypeptidase C serine protease (S10) family signature 124 134 IPR001563 GO:0004185|GO:0006508
Lan15g0734 471 PRINTS Carboxypeptidase C serine protease (S10) family signature 159 184 IPR001563 GO:0004185|GO:0006508
Lan15g0734 471 PRINTS Carboxypeptidase C serine protease (S10) family signature 428 441 IPR001563 GO:0004185|GO:0006508
Lan15g0734 471 Gene3D - 312 348 - -
Lan15g0734 471 Pfam Serine carboxypeptidase 36 457 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0734 Lan-Chr15 16271935 16278072 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0734 319 461 Calmodulin-binding Proteins AT2G22960 30.769 1.75e-14 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0734 K16297 - gmx:100815723 759.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0734 15 16271935 16278072 Lan3g1625 3 28096893 28107895 LSH