Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0718 ATGGAACAGAGTATCCTATGCAAATACACTGTCCATAATAGCGTCACAAAAAAGCTCGCAAAGCCAAAGAAAGGTTCTAATAGCAATACCATAGAGTCAATGGTTCCGAGAGTGGTTCGTATATCTGTTACTGATCCAGATGCCACTGACTCTTCTAGCGATGAAGAAGGAGAGAACCTGAACCGGAAGAGAATAAAACGTTATGTTAACCGTATCGACATTGAAACCTCCACCAAAAAACCCATTTCCGGTGTATCTAGAAAGAGGCCTGCGACTACCCAGAATAACATCCACCGGTCACCGGCGAAGGCTTCTTCCACCGTGAACACCACCGTGAGAAAGTTCCGTGGCGTGAGACAAAGGCCTTGGGGTAAATGGGCCGCAGAGATTCGAGACCCTTTGAAAAGGGTGAGGCTCTGGTTGGGTACTTATGACACTGCTGAAGAAGCTGCCATGGTTTATGATAATGCTGCGATTAAGCTTCGTGGACCTGATGCTTTGACAAATTTCATCACACCGCCATTGAAGGAAAAGCAAAAGGATCAACAAGAAGAAGAAGAAGCTGACACGGTGGTTGTCACGGCCGTGAAGCCAGAAATGAAGGTGGTTGTTAATGCTGAAGCTTCGGGTTCGAGTTATGATTCCGGCGATGATCAGTGCCGGATACTTTCATCTCCCACTTCTGTTCTTCAATTTAGAAATAATGAAGAGGCAACAGAGTCTCAAAAATCTCTTGAACCAGAACAAATGTCAGTGGAAGAAGTTTTCCGAGAGTGTGAAGGTGAAACAAGTTTATTTGATGAAACTGGTGAATTTTTTCAACTTGAAATGCCTATTTGGGACGAAGTATTCAATCTTGGAACACCACAATGCCTTGATGACATGCTCTTTGAAGAAGAAGAACAACAACAACCGAACATGATGTGTGAAACGACGCCGGTTTTGTCGGATGTTGATTTCTATGACAACCTTAACCTCGCTGATGAGCTTTTTGATTTTGACAAAGCATGTTCTCTTCCATCAAGTTTGTGCCAAGTGGATGATTATTTTCAAGACATTTTGTCATCTTCAGATCAACTCGTGGTTCTATGA 1092 0.4332 MEQSILCKYTVHNSVTKKLAKPKKGSNSNTIESMVPRVVRISVTDPDATDSSSDEEGENLNRKRIKRYVNRIDIETSTKKPISGVSRKRPATTQNNIHRSPAKASSTVNTTVRKFRGVRQRPWGKWAAEIRDPLKRVRLWLGTYDTAEEAAMVYDNAAIKLRGPDALTNFITPPLKEKQKDQQEEEEADTVVVTAVKPEMKVVVNAEASGSSYDSGDDQCRILSSPTSVLQFRNNEEATESQKSLEPEQMSVEEVFRECEGETSLFDETGEFFQLEMPIWDEVFNLGTPQCLDDMLFEEEEQQQPNMMCETTPVLSDVDFYDNLNLADELFDFDKACSLPSSLCQVDDYFQDILSSSDQLVVL* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0718 363 Gene3D AP2/ERF domain 113 172 IPR036955 GO:0003700|GO:0006355
Lan15g0718 363 MobiDBLite consensus disorder prediction 80 108 - -
Lan15g0718 363 ProSiteProfiles AP2/ERF domain profile. 114 171 IPR001471 GO:0003700|GO:0006355
Lan15g0718 363 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 6 356 - -
Lan15g0718 363 MobiDBLite consensus disorder prediction 43 62 - -
Lan15g0718 363 PRINTS Ethylene responsive element binding protein signature 115 126 IPR001471 GO:0003700|GO:0006355
Lan15g0718 363 PRINTS Ethylene responsive element binding protein signature 137 153 IPR001471 GO:0003700|GO:0006355
Lan15g0718 363 CDD AP2 114 170 IPR001471 GO:0003700|GO:0006355
Lan15g0718 363 Pfam AP2 domain 114 163 IPR001471 GO:0003700|GO:0006355
Lan15g0718 363 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF1-LIKE 6 356 - -
Lan15g0718 363 SUPERFAMILY DNA-binding domain 114 170 IPR016177 GO:0003677
Lan15g0718 363 SMART rav1_2 114 177 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0718 Lan-Chr15 16048125 16049641 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0718 7 362 AP2-EREBP Transcription Factor Family AT4G27950 38.147 1.59e-56 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lan15g0718 AP2 1.6e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0718 - - lang:109327510 701.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0718 15 16048125 16049641 Lan3g1633 3 28238719 28240343 LSH