Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0714 ATGAGAGATTCATCAAACAACATCATAGATGAAGTACTACAAGGTTTGGAGTTGGCAAGACAGCTCCAAATGAATCTCAGCGTGCCTTATTCTTGTAAAGAAACCCGTAATCAGTTGATTCAGAAGATCATATCAACATTTGAAAAGGCACTTCAAATGGTAAAATGGAAAAGAGAGTCATTGGGTGAGCCATCATCTCAACACCTTGCAATCAGAGTGTCAGAATCTCCACCTTTGAGCGACAGTGAAGGCTACATAGATCTGAAAGACCATGATCACATTGTTTCCAGAAAGAGAGAGACTTTGACAATATGGACAAAAACAATTAGAGTTAAACCAGGAATGGGGGTGGAAGAGCCTCTTGAAGATGGACACAGTTGGAGAAAATATGTGCAGAAGGACATTCTTGAAGCTGTGTATCCAAGAGGTTATTATAAATGCACCCACAGAAATATTCAAGGTTGCTTGGCCACAAAGAAAGAGCAAAGATCTGATGAAGACCCCACTGTCTTAGAAATCACTTACCGAGGAAAGCACACTTGCACAATGACCACCAATATAGTTACTCCATCTGCTCCAAATGAAAATCAAGAATCAAATTTGAACACAAATCCTCAGAATCAGAATAATAGCCTTCTAAGTCTTGAGCAGCAACCAAATCCAAATGAGCAAGTTTTGAACCTTAGGGCAGGTCTAAAAGTGCAAAGAGACAACCTTAATTCCTCCCCTCATGACCAATCATTTCCTTCAACTTCAAACATTAAAACTGAAAATCAAATTATCCCATTATCCCCTATGCTTGAAAACTGTAGTTCCCCTTCATATATATCTCCTGCCACTTCAGGAATAAGCCACTTTGCAGTTTCTCCAAGTTTGGCAAGTTCAGGGTTTCAGATCAATGACATGATCTCAGCTGCAAACTCACCAACCGTTGGATTAGAGTTTCCATTTGACCAGTTTGAATTTGATGGTCATAACTTCACTTTGGATAACCTTCCATTTTTCTTCTAA 1011 0.3927 MRDSSNNIIDEVLQGLELARQLQMNLSVPYSCKETRNQLIQKIISTFEKALQMVKWKRESLGEPSSQHLAIRVSESPPLSDSEGYIDLKDHDHIVSRKRETLTIWTKTIRVKPGMGVEEPLEDGHSWRKYVQKDILEAVYPRGYYKCTHRNIQGCLATKKEQRSDEDPTVLEITYRGKHTCTMTTNIVTPSAPNENQESNLNTNPQNQNNSLLSLEQQPNPNEQVLNLRAGLKVQRDNLNSSPHDQSFPSTSNIKTENQIIPLSPMLENCSSPSYISPATSGISHFAVSPSLASSGFQINDMISAANSPTVGLEFPFDQFEFDGHNFTLDNLPFFF* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0714 336 Pfam WRKY DNA -binding domain 122 181 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan15g0714 336 ProSiteProfiles WRKY domain profile. 116 184 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan15g0714 336 SMART WRKY_cls 121 183 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan15g0714 336 Gene3D WRKY domain 113 184 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan15g0714 336 SUPERFAMILY WRKY DNA-binding domain 119 183 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan15g0714 336 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED 5 331 - -
Lan15g0714 336 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 5 331 IPR044810 GO:0003700
Lan15g0714 336 MobiDBLite consensus disorder prediction 186 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0714 Lan-Chr15 15950564 15951893 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0714 6 200 WRKY Transcription Factor Family AT5G24110 36.816 6.86e-38 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lan15g0714 WRKY 2.7e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0714 - - gmx:100812027 359.762
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0714 15 15950564 15951893 Lan14g0551 14 11703144 11705600 LSH