Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0702 ATGAAATATATGTTTATTCTCCTTGTCACTTTTAAGATTCTCAAGAAGCTCACAAAAATACAAGAGGCTATGGGATTTCAAACCTCACATGCTACAAAACGGATTGCACAACCAATTTTCATAGCAAAGGAGGAATCAAGCGATGCCAATTCAACTCCATTTCAAAGGGCATTGAACTTGAATGACAACAATATAACCAATGCCAATTCAATTTCCTCATGCTATGATTCATGGATGGCAAAACACCCTTCTGCATTACACTCCTTTGATACTTTGATGAAAGCAGCCATTGGGAAGAAAATCATTGTTTTTTTAGACTATGATGGTACTTTATCACCCATTGTAAATGACCCTGATCGTGCTTTCATGTCAGATGAGATGCGTGCAGCAGTATCTGAAATTGCATCTTATTTTCCAACTGCTATAATTAGTGGAAGGAGCAGAGAAAAGGTGAAAGATTTTGTGAAATTGAGTAATTTATACTATGCGGGTAGCCATGGTATGGACATAATGGCACCATCATCAATGTCAGTTGGATCTTCTAACAGTGAGCATTGTGACATGTCTCACAACATAAATGGTAATGAAGTTCCCTTTCAACCTGCAAAGAAGTTTCTGCCTGCAATTCGAGAGCTATTAAGAAGATTAGAGAACGAAGTTAAGGAGATAGAAGGTGCAAAGTTAGAGGACAATGGATTCTGCATCTCTGTACATTTCCGGCATGTTCTAGAAGAGGATTATGGCCTTTTGGAAGAGAAGGTGAAGTGTGTTCTTGAAATGAATCCACAATTTCACTTAACTGAGGGTATAAAGGTTATGGAAATAAGGCCATCAATAGAATGGAACAAGGGTAATGCTGTGGAATATTTTCTTGACACATTAGGATTAAGCAGTTCCAGCAATATCCTCCCGGTGTATATTGGGGACGATCGAACTGACGAAGACGCTTTTAAGGTCATACAGAGTAGAGGGCAAGGTTATCCAATAATAGTATCTTCAACTCCAAGAGAAACAAATGCTTTCTACTCTTTGCGTGACCCATCGGAGGTACTAATCTTCTTGTCAAGGCTAGCAAAATGGAGGAAAAACTCTTACTCATGCAGACCTTTAAATTTAGGCTAA 1122 0.385 MKYMFILLVTFKILKKLTKIQEAMGFQTSHATKRIAQPIFIAKEESSDANSTPFQRALNLNDNNITNANSISSCYDSWMAKHPSALHSFDTLMKAAIGKKIIVFLDYDGTLSPIVNDPDRAFMSDEMRAAVSEIASYFPTAIISGRSREKVKDFVKLSNLYYAGSHGMDIMAPSSMSVGSSNSEHCDMSHNINGNEVPFQPAKKFLPAIRELLRRLENEVKEIEGAKLEDNGFCISVHFRHVLEEDYGLLEEKVKCVLEMNPQFHLTEGIKVMEIRPSIEWNKGNAVEYFLDTLGLSSSSNILPVYIGDDRTDEDAFKVIQSRGQGYPIIVSSTPRETNAFYSLRDPSEVLIFLSRLAKWRKNSYSCRPLNLG* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0702 373 TIGRFAM T6PP: trehalose-phosphatase 191 359 IPR003337 GO:0003824|GO:0005992
Lan15g0702 373 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 102 321 IPR006379 -
Lan15g0702 373 Pfam Trehalose-phosphatase 104 348 IPR003337 GO:0003824|GO:0005992
Lan15g0702 373 SUPERFAMILY HAD-like 102 362 IPR036412 -
Lan15g0702 373 Gene3D - 101 194 IPR023214 -
Lan15g0702 373 Gene3D - 197 368 IPR023214 -
Lan15g0702 373 Coils Coil 206 229 - -
Lan15g0702 373 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 62 367 IPR044651 GO:0004805|GO:0005992
Lan15g0702 373 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 62 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0702 Lan-Chr15 15718946 15728552 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0702 103 358 Trehalose Biosynthesis Gene Families AT1G70290 25.735 2.07e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0702 K01087 - gmx:100809194 543.502