Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0687 ATGTATGCAGAGACAGGTCTTTTCTTCCCATACTTGCAGAACTTCTCTCAAGATCTTCATCAACTTGAAGAGTACTGCAAAACCCATAAAACTAATGTTTCATTGTGGGGTTTGTCTTTTTGTGCCGCACTGAAGGAGAAACAAGAGAGCGACTTTGTTCAGTCTTCTGCCATGTCAGAGTACGATTTTGCGGCAGAAGGAGATCTGTTCAAAGCACCTGAACCAATTATCGAAGAATCATTCATGGACCTGGATCCTATGACAGCAGCAATCTCAATGATGTCTTGTGGAGAAGGTGTCTCGTGTCGAGGACTTCAATCCACAGACATTGATGTTCTTCAAAAAGAACAACTTCTAAGTGACATGTTGTATGAGTGCGAAAAGGATCTCTTAGAAAAGGCTGCAATAGAATCACCACTCTCTCAGATTTTGGAAATCAAGGTTCCTTCTTTGAACATGGATGAGTACTCAATTCAAGAAGACAAACCATTTCCTGACATGCCGAAGAGTGTAAGTTCAGTAAGCTTGAGCTCATTGGACTGGATGCATGGAGCTGCAATGAAGCCAGCTTTCCTTGATTTCCCAGGAATAGATTTCAATTCAGATTATGGCATGCGAAGATCATTTAGTGAAGGAGATATAAAGGCTCTCGGTAATGGTAGTTTGAACATCGTCCAGTCTCCCCGTGAGAGGCCCTTTCTTATCAGCAACTGCACCAGTGAGGAACGCCAAGAAAAGCTTTCCAGGTACAGGCATAAGAAGACCAAGAGGAATTTTGGGAGGAAAATCAAGTATGCTTGTAGGAAAGCTCTTGCTGACAGTCAACCAAGAATCCGTGGAAGATTTGCGAAGACCGAAGAATCCGATGTCAAAAGGCAATAA 882 0.4263 MYAETGLFFPYLQNFSQDLHQLEEYCKTHKTNVSLWGLSFCAALKEKQESDFVQSSAMSEYDFAAEGDLFKAPEPIIEESFMDLDPMTAAISMMSCGEGVSCRGLQSTDIDVLQKEQLLSDMLYECEKDLLEKAAIESPLSQILEIKVPSLNMDEYSIQEDKPFPDMPKSVSSVSLSSLDWMHGAAMKPAFLDFPGIDFNSDYGMRRSFSEGDIKALGNGSLNIVQSPRERPFLISNCTSEERQEKLSRYRHKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTEESDVKRQ* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0687 293 PANTHER CCT MOTIF FAMILY PROTEIN 39 291 - -
Lan15g0687 293 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 39 291 - -
Lan15g0687 293 Pfam CCT motif 243 285 IPR010402 GO:0005515
Lan15g0687 293 ProSiteProfiles CCT domain profile. 243 285 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0687 Lan-Chr15 15533258 15538523 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0687 239 289 C2C2-CO-like Transcription Factor Family AT5G24930 49.020 7.79e-10 57.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lan15g0687 CCT 2.4e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0687 - - lang:109334668 451.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0687 15 15533258 15538523 Lan14g0536 14 11077441 11082064 LSH
Lan15g0687 15 15533258 15538523 Lan3g0808 3 15107285 15111630 LSH