Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0685 ATGAAGAAGAAGATCATCTTCCTCTCACTTCTCACCATCGTCTTAATCTCAGCTTCCGCAGCCTCCGCTGTTCTCATCCTCTCCGTACACTTTCGACCTTCTGACAATGGCCAAAATGCCCCCACCCGACTCAGCAAACCCACCCAAGCCATCTCTATAACCTGCAACAAAACGCGATTCCCTTCTCTATGCACAAACTATCTACTCCAGTTCCCTGCTTCCAAAACGGCGTCGGAGAAAGACCTCATTCACATTTCAATCAACATCACCCTGCAACACCTCACCAAGGCTCTCTACTCCTCCGTCTCCCTCTCCGATTCTATCTCCACCGTCTCCCCTCGCGTCCAAGCCGCTTACGACGACTGCCTTGAGCTCCTTCATGACTCCATCGACGCCCTCTCCCGCTCTCTTATCTCCGTCGCTCCGCCCTCCTCCTCCGTCTCCGGCGACATCAGGCCTCTAGGCTCCTACGATGATGTGCTGACGTGGCTGAGCGCCGCACTCACCAATGAGGACACATGTGCGGAGGGCTTCGCCGACACTAACGGCGGCATTACGGACCAGATGGCGAACAATCTGAGGGACTTATCGGAGCTCTTGAGTAACTGTTTGGCGATATTTTCCTCTATCGGTGCTGGTGATGATTTCTCAGGAGTGCCGATACAGAACAAGAGAAGATTGATGACAATGCGAGAAGATAATTTCCCGAGATGGTTGAAAACACGAGATAGGAGATTGTTGAGCTTACCCGTAAATGAGATACAACCTGATGTTATCGTTTCTAAAGATGGTAATGGAGTGGTGAAGAAAATCTCTGAAGCAATTAAGAAAGCACCAGAGTATAGTAGCCGGAGATTCATTATCTACGTAAGGGCAGGAAGGTACGAAGAGAACAATTTAAAGGTGGGGAGAAAGAAAACCAATCTTATGTTGATAGGTGATGGGAAGGGCAAGACGGTCATCACAGGCCGTAAAAACTTTCTGAATGGCACTACCACATTTCGCACCGCATCATTCGCTGCTAGTGGTGCTGGTTTTATAGCAAGAGACATAACATTCGAGAATTACGCCGGACCTGATAAGCACCAAGCAGTGGCCCTTCGTGTTGGATCCGACCACTCGGTGATCTATCGATGTAGCATCATCGGTTATCAAGACACATGCTATGTACATTCTAACCGTCAATTCTTCCGCGAATGTGACATATATGGCACAATTGATTTCATATTCGGCAACGCTGCAGTGGTTTTCCAAAATTGCAGCCTCAATGCTCGCAAGCCCATGGCCCAACAGAAAAACAGTATCACGGCCCAAAATAGAAAGGACCCTAACCAAAACACTGGCATTTCAATCCATGACTGCCAAATTCGACCCACACCAGATTTGGAAGCAGTCAAGGGTAAATACCAAACGTATTTGGGTCGACCATGGAAACTACACTCGAGAACTGTATACATGATGTCATATATGGATGATCACATACATCAATGTGGATGGTTGGAGTGGAATAAAACATTTGCCTTAAACACATTGTATTATGGTGAGTACATGAATTATGGGCCGGGTGCAGCAATTGGGCAACGGGTTCAATGGCCCGGGTATCGGGTTATCACGTCGACCGTCGAAGCCAGCAGGTTTACGGTGGGCCAGTTCATATCGGGCTCAACATGGTTGCCCTCTACTGGAGTTTCATTCATGGTTGGGCTATCCAGTTGA 1716 0.4825 MKKKIIFLSLLTIVLISASAASAVLILSVHFRPSDNGQNAPTRLSKPTQAISITCNKTRFPSLCTNYLLQFPASKTASEKDLIHISINITLQHLTKALYSSVSLSDSISTVSPRVQAAYDDCLELLHDSIDALSRSLISVAPPSSSVSGDIRPLGSYDDVLTWLSAALTNEDTCAEGFADTNGGITDQMANNLRDLSELLSNCLAIFSSIGAGDDFSGVPIQNKRRLMTMREDNFPRWLKTRDRRLLSLPVNEIQPDVIVSKDGNGVVKKISEAIKKAPEYSSRRFIIYVRAGRYEENNLKVGRKKTNLMLIGDGKGKTVITGRKNFLNGTTTFRTASFAASGAGFIARDITFENYAGPDKHQAVALRVGSDHSVIYRCSIIGYQDTCYVHSNRQFFRECDIYGTIDFIFGNAAVVFQNCSLNARKPMAQQKNSITAQNRKDPNQNTGISIHDCQIRPTPDLEAVKGKYQTYLGRPWKLHSRTVYMMSYMDDHIHQCGWLEWNKTFALNTLYYGEYMNYGPGAAIGQRVQWPGYRVITSTVEASRFTVGQFISGSTWLPSTGVSFMVGLSS* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0685 571 CDD PMEI-like_3 55 210 - -
Lan15g0685 571 Pfam Plant invertase/pectin methylesterase inhibitor 51 206 IPR006501 GO:0004857
Lan15g0685 571 TIGRFAM PME_inhib: pectinesterase inhibitor domain 21 208 IPR006501 GO:0004857
Lan15g0685 571 Gene3D - 251 569 IPR012334 -
Lan15g0685 571 PANTHER PECTINESTERASE 5 569 - -
Lan15g0685 571 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 50 209 IPR035513 -
Lan15g0685 571 ProSitePatterns Pectinesterase signature 2. 402 411 IPR033131 -
Lan15g0685 571 Gene3D Invertase/pectin methylesterase inhibitor family protein 48 211 IPR035513 -
Lan15g0685 571 SMART PMEI_2 46 206 IPR006501 GO:0004857
Lan15g0685 571 Pfam Pectinesterase 257 554 IPR000070 GO:0030599|GO:0042545
Lan15g0685 571 PANTHER PECTINESTERASE 5 569 - -
Lan15g0685 571 SUPERFAMILY Pectin lyase-like 255 568 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0685 Lan-Chr15 15508088 15512007 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0685 2 570 Carbohydrate Esterase AT3G49220 64.747 0.0 747
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0685 - - gmx:106796002 803.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0685 15 15508088 15512007 Lan14g0534 14 11031666 11035903 LSH