Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0673 ATGGAGTTTCACTCTCACTCTCAACATGCTTTCCCTAACATTGAAGTTGCTCAAAGAGACAACTGGTTTTTCTCTCCTCTACAAACAAAAACAGACAAAATGATGGAATTTTCACCATGGGAAGATTTCCTTGAGTTTGATTTCGCACCCCAGTTCCCATACCAAAGAAATCAACTTAGCTTCAATGGGTCACTAGAACTCGATAATCTCAACTTTGATGACATCAACATTCCACCCCTTGATGAAAACTTTGGGCTTGAACAAAAGCCAATGATGAACGTTATTGTGCCACAGCCACCACCACCTTATGGCTTTGGTGATGAAGGTTTGGTGACTTGTGTAAAGGAAGAAGTGATGGAGAACAATCAAGATATGCTATTATTACCTAATAGCAACATGCAAAAGAGAGCATGTGCTTGGGAGTTTGAGGAGATAAAGAAAGTAGTGAAGGAGAACAATGAAGAGATGCTATGTTTGCCTAATACTAAAAGTAGCAGCAAGAAGCATAGGTCAAGTGTTTTGGAGTTTGAGGATATTAAGAAGCATTTTGGTGTTCCAATAACTGAAGCTGCAAAGGAATTAAATATTGGGGTGACACTTTTGAAAAGAAGGTGTAGGGAGCTTAATATCATGAGATGGCCACACAGGAAATTGAAAAGCTTGAAGTTGCTCATAGACAATGTCAAGGAAATGGGTCTGTCCAACGAGGTTGCTTTGTTGGAGCAGCATATAAAAATGTTGGAGCAAGTACCTGGGATGGAACTCACTGAAGAAACCAAGAAACTTAGACAGGCTTGTTTTAAAGCTAATTTCAAGAAGAGAAGATGTTTAGTTCTTTAA 840 0.3905 MEFHSHSQHAFPNIEVAQRDNWFFSPLQTKTDKMMEFSPWEDFLEFDFAPQFPYQRNQLSFNGSLELDNLNFDDINIPPLDENFGLEQKPMMNVIVPQPPPPYGFGDEGLVTCVKEEVMENNQDMLLLPNSNMQKRACAWEFEEIKKVVKENNEEMLCLPNTKSSSKKHRSSVLEFEDIKKHFGVPITEAAKELNIGVTLLKRRCRELNIMRWPHRKLKSLKLLIDNVKEMGLSNEVALLEQHIKMLEQVPGMELTEETKKLRQACFKANFKKRRCLVL* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0673 279 PANTHER PROTEIN RKD4 22 276 IPR044607 GO:0003700
Lan15g0673 279 ProSiteProfiles RWP-RK domain profile. 161 242 IPR003035 -
Lan15g0673 279 PANTHER PROTEIN RKD1-RELATED 22 276 - -
Lan15g0673 279 Pfam RWP-RK domain 174 221 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0673 Lan-Chr15 15383353 15384953 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0673 174 277 AtRKD Transcription Factor Family AT5G53040 60.577 7.83e-38 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Lan15g0673 RWP-RK 8.8e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0673 - - lang:109327731 566.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0673 15 15383353 15384953 Lan15g0673 15 15383353 15384953 ECH
Lan15g0673 15 15383353 15384953 Lan14g0524 14 10901301 10902455 LSH