Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0663 ATGGGTAGCTTCAGTGGAGACGAGGAATGTCCGTTTTTCGATGCTGTTGAGGATGTTGTATCAATTGCTGATACAAAATTGGACAATGACAGTGTTTTTACTCCTAGAGAAGGGAAGTCCAACGGTTTTGATTATGAATTTTGGATTCAGAGCCCGAGGAGTGTGAAAGAACGTAGGAGTAGGTTTATGAAGAGGATCGGGTTGAGTGTAGAAGGGAAGGGAGTTAGAGATTCAGTGGATTTGTGTGGTGGTGGTGGTGTTGATGTGGAAGAGGTGAATGATAGATTGAACGATAGTAGCAGTGCTGTGGATAGGAGTTGTGGTTTTGAGGAGGAGTTTTGTTCGAGCCGGTCATCATTGTCTTGTTGGTCTACAATGAATTCTTCAGAGGAGTTTGGTTTGGTGAAGAATTTGCCATGTAATGTGGATCAGGAGGGGCAGGATAGGAAGATGTGTGATTGTAGTAGATATGTGGATTCGGGGGATTCGGATCGGTTGGTGGTTGCTGAAGAGCCAGAGGTTTCTGAGAACACCTTCCAACGTCTGTCAAGTAGGGGATTTGAGGAAACGGATGCTGATGTGAATGCTTTATCAAAGAGGATGAACAGGTCTAGAAGGGGTTGGTTTCGAAGATTACGGTCTATAATGTGTATAATGGATACACAAGGTGAATCTGAAAATCAGGGACAAGGAGATAGTTGTAGATTCTTAGGGTGTAAGCTTCAGAAAGTTAAGGTTCGTCAATGTAAGAAGCAAATGAAGGAACTTTCAGCTCTTTACATGAAGCAAGACATTCAAGCCCACGAAGGTTCAATTTTGGCCATGAAATTCAGCCCTGACGGACAGTATCTTGCCAGTGCTGGTGAAGATGGGGTTGTGCGCGTGTGGCAAGTGGTTGTGGAGGATCGGTGTAATGAAATTGACATTCCAGAAATCGATCCATCCTGCATTTACTTCACAGTGAATAATCTCTCTGAATTGACACCACTGTTTATGGAAAAGGAAAAAAATAGCAAAGTGGAGGGCCTGAAAAAAACATCAGATTCAGCTTGCATTATTTTCCCTCCTAAGATCTTCCGGTTGTTGGAGAAACCATTGCATGAGTTCCATGGTCATAAAGGTGAAGTTTTGGATCTCTCTTGGTCAAAGAATAATTATCTCCTGTCATCTTCGGTTGACAAAACTGTCCGTCTATGGCACGTGAAACATGAAAATTGCCTGAAAGTTTTCTCGCACAGCAATTATGTGACATGCATACAATTCAACCCATTGGATGATAATTATTTCATTAGCGGATGTATAGATGGAAAAGTGCGCATCTGGGCAATACCTGATTGTCATGTTGTTGATTGGGTTGATATTAGAGACATAGTGACTGCAGTGTGTTTTCGGCCTGATGGGCAGGGAGGAATTATTGGCTCCATGGCGGGCAACTGTCGATATTTTAATGTAGCAGAGAATCACTTGAAGTTAGATTCCCAACTATGCTTGCTTGGTAAAAAGAAACTTCCTGGCAGGGGGGTAACTAGCTTTCAGTTCCTTCCACAGGATTCTAATAAAGTTATGGTTACTTCTTCTGGTTCACAAGTCAGAATCCTTGATGGGCTTAATGTGACTGGCAAATACAAAAGCCTTAGTGCTGCGAGTGCAATGTCGGCATCTTTTACTTCCGATGGGAAACATATATTATCAGCCTGTGAGGACTCTAATGTATATCTATGGAATGTTAGCCAGGACGAGTCTAGTCCCACAAAAGCTAAGAAGATTACATCCTGTGAACGGTTTTTCTCAAATGCATCTGTTGCAGTGCCGTGGCAAGGTTTGAAATCTCAAGATATTGAAAGTGTACATCAATTAGATGCCTTGGATAAAAGATCAACTCCTCAAGGTATGCAATTCAATCCACCTGCTTCCTTCTCTCTGGACCAAAAGTTTTTCTTGGAGTCTTTGCCCAAGGGATCTGCGACTTGGCCTGAAGAGAAGCTTCCCGTTTCAAGCCCCAAGGCTAAAACATGTGCAATGCGTAAATCTGAATACAAGTTCTTGAAATCTTCTTGCAAGAGTACTTCCTGTTCACATGCGTGGGGTATGGTGATTGTGAGTGCAGGATGGGATGGACGTATAAAATCATTCCACAATCACGGGTTACCCATACCCGTTTGA 2163 0.4272 MGSFSGDEECPFFDAVEDVVSIADTKLDNDSVFTPREGKSNGFDYEFWIQSPRSVKERRSRFMKRIGLSVEGKGVRDSVDLCGGGGVDVEEVNDRLNDSSSAVDRSCGFEEEFCSSRSSLSCWSTMNSSEEFGLVKNLPCNVDQEGQDRKMCDCSRYVDSGDSDRLVVAEEPEVSENTFQRLSSRGFEETDADVNALSKRMNRSRRGWFRRLRSIMCIMDTQGESENQGQGDSCRFLGCKLQKVKVRQCKKQMKELSALYMKQDIQAHEGSILAMKFSPDGQYLASAGEDGVVRVWQVVVEDRCNEIDIPEIDPSCIYFTVNNLSELTPLFMEKEKNSKVEGLKKTSDSACIIFPPKIFRLLEKPLHEFHGHKGEVLDLSWSKNNYLLSSSVDKTVRLWHVKHENCLKVFSHSNYVTCIQFNPLDDNYFISGCIDGKVRIWAIPDCHVVDWVDIRDIVTAVCFRPDGQGGIIGSMAGNCRYFNVAENHLKLDSQLCLLGKKKLPGRGVTSFQFLPQDSNKVMVTSSGSQVRILDGLNVTGKYKSLSAASAMSASFTSDGKHILSACEDSNVYLWNVSQDESSPTKAKKITSCERFFSNASVAVPWQGLKSQDIESVHQLDALDKRSTPQGMQFNPPASFSLDQKFFLESLPKGSATWPEEKLPVSSPKAKTCAMRKSEYKFLKSSCKSTSCSHAWGMVIVSAGWDGRIKSFHNHGLPIPV* 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0663 720 ProSitePatterns Trp-Asp (WD) repeats signature. 562 576 IPR019775 -
Lan15g0663 720 SUPERFAMILY WD40 repeat-like 260 710 IPR036322 GO:0005515
Lan15g0663 720 Pfam WD domain, G-beta repeat 266 296 IPR001680 GO:0005515
Lan15g0663 720 Pfam WD domain, G-beta repeat 405 441 IPR001680 GO:0005515
Lan15g0663 720 Pfam WD domain, G-beta repeat 364 399 IPR001680 GO:0005515
Lan15g0663 720 ProSiteProfiles Trp-Asp (WD) repeats profile. 409 441 IPR001680 GO:0005515
Lan15g0663 720 Gene3D - 362 500 IPR015943 GO:0005515
Lan15g0663 720 Gene3D - 501 581 IPR015943 GO:0005515
Lan15g0663 720 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 265 298 - -
Lan15g0663 720 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 409 441 - -
Lan15g0663 720 ProSiteProfiles Trp-Asp (WD) repeats profile. 369 409 IPR001680 GO:0005515
Lan15g0663 720 ProSiteProfiles Trp-Asp (WD) repeats profile. 265 298 IPR001680 GO:0005515
Lan15g0663 720 Gene3D - 95 308 IPR015943 GO:0005515
Lan15g0663 720 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 369 402 - -
Lan15g0663 720 PANTHER WD REPEAT DOMAIN 44 7 719 IPR040324 -
Lan15g0663 720 SMART WD40_4 403 442 IPR001680 GO:0005515
Lan15g0663 720 SMART WD40_4 494 534 IPR001680 GO:0005515
Lan15g0663 720 SMART WD40_4 538 575 IPR001680 GO:0005515
Lan15g0663 720 SMART WD40_4 674 712 IPR001680 GO:0005515
Lan15g0663 720 SMART WD40_4 258 297 IPR001680 GO:0005515
Lan15g0663 720 SMART WD40_4 444 483 IPR001680 GO:0005515
Lan15g0663 720 SMART WD40_4 362 400 IPR001680 GO:0005515
Lan15g0663 720 ProSiteProfiles Trp-Asp (WD) repeats profile. 552 584 IPR001680 GO:0005515
Lan15g0663 720 PRINTS G protein beta WD-40 repeat signature 284 298 IPR020472 -
Lan15g0663 720 PRINTS G protein beta WD-40 repeat signature 387 401 IPR020472 -
Lan15g0663 720 PRINTS G protein beta WD-40 repeat signature 429 443 IPR020472 -
Lan15g0663 720 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN 7 719 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0663 Lan-Chr15 15258494 15263313 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0663 265 423 U-box Gene Family AT2G33340 23.529 4.14e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0663 - - gmx:100817209 1001.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0663 15 15258494 15263313 Lan15g0663 15 15258494 15263313 ECH