Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0656 ATGGCAGCTTTTACATCAAATGCTATACATTACTCATCTACATCATCTTTACAACACTTGGTGCCTTCTTTAGAAGGTACACTTGATCATAGTTCATGCTGGTTGAGCATGAGATCACAGAAATCCACAGGTCAAAGATTGTACCAACAGAATATGGGAAGGAGACTAAAAATCCAGGGTGCAGCCACAAAACAAGCAAAAACACCAGCTGAAGAAGACTGGAAGATTAAGAGAGAAACACTTCTGGGAAAAAAGGTAAGAAGTGTGGAAGCAAAGGAAGCTCTGCGCCTTCAGAAAGAAAATAAGTTTGTGATTCTGGATGTAAGGCCTGAAGCAGAGTTCAAAGAGGCTCATCCTCAAGATGCTATAAATGTGCAAATATATAGACTTATAAAAGAGTGGACAGCATGGGACATTGCAAGACGTGCTGCATTTGCATTCTTTGGTATTTTTGCTGGTACAGAAGAGAACCCAGAATTCATCAAGAGTGTTGAAGCAAAATTAGATAAAAATGCAAAGATAATAGTAGCTTGCTCATCAGGTGGTACAATGAAACCATCACAAAATCTGCCAGAAGGTCAACAATCAAGATCTCTTATAGCAGCATACTTGCTGGTCCTTAATGGTTTCACCAATGTCTACCATCTGGAAGGGGGTCTATACGCATGGTTTAAAGAGGGTCTACCAACTGTTTCCGAGGAGTGA 705 0.4028 MAAFTSNAIHYSSTSSLQHLVPSLEGTLDHSSCWLSMRSQKSTGQRLYQQNMGRRLKIQGAATKQAKTPAEEDWKIKRETLLGKKVRSVEAKEALRLQKENKFVILDVRPEAEFKEAHPQDAINVQIYRLIKEWTAWDIARRAAFAFFGIFAGTEENPEFIKSVEAKLDKNAKIIVACSSGGTMKPSQNLPEGQQSRSLIAAYLLVLNGFTNVYHLEGGLYAWFKEGLPTVSEE* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0656 234 CDD RHOD 93 223 - -
Lan15g0656 234 Gene3D - 84 233 IPR036873 -
Lan15g0656 234 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 14, CHLOROPLASTIC-RELATED 14 234 IPR043186 -
Lan15g0656 234 ProSiteProfiles Rhodanese domain profile. 99 232 IPR001763 -
Lan15g0656 234 Pfam Rhodanese-like domain 91 224 IPR001763 -
Lan15g0656 234 SMART rhod_4 89 229 IPR001763 -
Lan15g0656 234 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 14, CHLOROPLASTIC 14 234 - -
Lan15g0656 234 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 84 231 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0656 Lan-Chr15 15120769 15123054 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0656 1 234 Sulfurtransferasese or Rhodanese AT4G27700 62.295 3.12e-101 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0656 - - gmx:100788147 375.555
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0656 15 15120769 15123054 Lan15g0656 15 15120769 15123054 ECH