Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0629 ATGGAGAACCTGTGTGGCTTCAACTATTCAGAGCAATCATCAATGGCTCCACCATCATTACCACAGACCAGTCACAACTTGATTTCATCGGATCTTCAATTAGTCCAGTCTTGTTCTTCTGCATCAGATGAAGTACTGTGGTCTAAGGCTGTGGGTGAGGAAGATGTTTCTCTTCGCGCTAAAGTTGCTTCTCACCCACTTTTTCCTCGGCTTCTACATGCTTATATCGATTGCCTGAAGTTGGGATCGCCGCCGCCAGAGATGGCGCAACTATTAGATGAAATAAGAGGAGAGAACAATGGTTTGTGTCAGATATCAAGCTTCTATGGTGTTGATCCTGAGCTTGACAACTTCATGGAAACGTATTGCAATTTATTGGTGAAGTATAAATCAGATATTTCAAGGCCTTTTGACGAAGCCACTACGTTCCTCAACGACATGGAAACACAGCTTAACTCCATTCGCAACGGCCTTCCTAACATTTCTCCAGATAGTGTGCCACATGGATCATCTGAAAAGGGTCCTAGTATTGTGGAGAATGAAGCCATTGACAACAATAGGATAAATGAAGAACGAGAGCTGAAAGATAACCTTCTACATAGATATAGCGGCTACATTAGTAGTTTGAAGCATGAATTATCCAAAACTAAGAAGAAGCAAAGGCTACCCGAAGAAGCAAAGCAAATCTTGCTTGCATGGTGGAATGTTCACTTTGAATGGCCATACCCAACGGATGCAGATAAGGTTACCCTAGCTGAATGGACTGGTCTAGACCAGAAGCAGGTAAACAATTGGTTTATAAACCAAAGGAAGCGCCGTTGGAAAAAAACTGAGGAAATGCAAACAGTTCTAAAAGGTCTATATGGACCTTTCTGCATGAGTGACAGTGACTGA 894 0.4251 MENLCGFNYSEQSSMAPPSLPQTSHNLISSDLQLVQSCSSASDEVLWSKAVGEEDVSLRAKVASHPLFPRLLHAYIDCLKLGSPPPEMAQLLDEIRGENNGLCQISSFYGVDPELDNFMETYCNLLVKYKSDISRPFDEATTFLNDMETQLNSIRNGLPNISPDSVPHGSSEKGPSIVENEAIDNNRINEERELKDNLLHRYSGYISSLKHELSKTKKKQRLPEEAKQILLAWWNVHFEWPYPTDADKVTLAEWTGLDQKQVNNWFINQRKRRWKKTEEMQTVLKGLYGPFCMSDSD* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0629 297 MobiDBLite consensus disorder prediction 158 180 - -
Lan15g0629 297 SMART ELK_2 193 214 IPR005539 GO:0003677
Lan15g0629 297 SMART KNOX2_2 105 156 IPR005541 GO:0003677|GO:0005634
Lan15g0629 297 Gene3D - 210 283 - -
Lan15g0629 297 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 6 49 295 - -
Lan15g0629 297 SMART KNOX1_2 56 101 IPR005540 GO:0003677|GO:0005634
Lan15g0629 297 SMART HOX_1 215 280 IPR001356 GO:0003677
Lan15g0629 297 ProSiteProfiles 'Homeobox' domain profile. 213 276 IPR001356 GO:0003677
Lan15g0629 297 SUPERFAMILY Homeodomain-like 215 282 IPR009057 -
Lan15g0629 297 ProSiteProfiles ELK domain profile. 193 213 IPR005539 GO:0003677
Lan15g0629 297 Pfam Homeobox KN domain 233 272 IPR008422 GO:0003677|GO:0006355
Lan15g0629 297 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 49 295 - -
Lan15g0629 297 Pfam KNOX1 domain 58 99 IPR005540 GO:0003677|GO:0005634
Lan15g0629 297 Pfam ELK domain 193 214 IPR005539 GO:0003677
Lan15g0629 297 Pfam KNOX2 domain 110 154 IPR005541 GO:0003677|GO:0005634
Lan15g0629 297 CDD homeodomain 217 278 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0629 Lan-Chr15 14270653 14288784 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0629 1 295 Homeobox Transcription Factor Family AT1G70510 45.741 9.23e-80 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-KNOX Lan15g0629 KNOX2 1e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0629 - - gmx:102662019 322.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0629 15 14270653 14288784 Lan14g0327 14 6523238 6524561 LSH