Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0622 ATGGCATCATCATCTTGCTCCTACAATTCTCCTTGTGCTGCCTGCAAATTCTTGAGGAGGAAATGCATGCCAGAATGCGTCTTTGCACCATACTTCCCACCCGAAGAACCCCAAAAATTTGCCAACGTTCACAAGATCTTTGGTGCTAGCAATGTGACTAAGCTCCTTAACGAACTCCTCCCTCAGCAGAGGGAAGATGCTGTGAATTCCCTTGCTTATGAAGCAGAAGCACGGGTGAGAGATCCTGTGTATGGTTGTGTAGGAGCTATAACCTTCCTTCAGAGACAAGTTCAAAGGCTTCAAAAGGAGCTTGATGCTGCTAACGCCGAGCTTCTACACTATGCTTACAATGAAATCTCTCCACTTCCAACATCTCTTGCAATTTCACCACTAACTCCACTTCAACAAATTCCACAAAGGACACAGTTTGGTGCAAGAATTGGTAATGAAGGAAGTGGGTTTTATAGGCAATCTCCTGTCACTTACTCTTTTCCTTATTCCCTTCCATGGAATAATGATACCTCTTTGGAGGATATCAATGAAGGAGGAGGTAGTTTATGA 561 0.4385 MASSSCSYNSPCAACKFLRRKCMPECVFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPQQREDAVNSLAYEAEARVRDPVYGCVGAITFLQRQVQRLQKELDAANAELLHYAYNEISPLPTSLAISPLTPLQQIPQRTQFGARIGNEGSGFYRQSPVTYSFPYSLPWNNDTSLEDINEGGGSL* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0622 186 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 3 179 - -
Lan15g0622 186 PANTHER ELONGATED PETIOLULE 1 3 179 - -
Lan15g0622 186 ProSiteProfiles LOB domain profile. 10 111 IPR004883 -
Lan15g0622 186 Pfam Lateral organ boundaries (LOB) domain 11 108 IPR004883 -
Lan15g0622 186 Coils Coil 90 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0622 Lan-Chr15 14119785 14122046 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0622 1 180 AS2 family AT5G63090 64.249 3.80e-75 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lan15g0622 LOB 2.8e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0622 - - gmx:100803667 285.034