Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0620 ATGACACTCACACACAGCCACACCGTCAAGCTTCTCTATAGTTACGGCGGCAAGATTCTCCCACGCGCCACTGACGGCGAACTCCGTTACGTTGGTGGCTACACCAGAGTCCTCACCGTTGAATTTTCCGTTACCTTTTCAGAATTAATGGCGAAACTCGCGGAATTATGCGGTTCCTCTGTTACTTTAAGGTGTCAATTACCAAACGGAGATTTTGAAACCTTGATTTCCATCACCAACGACGAAGATTTGACGAACATAATCGAAGAATATGATCGTGCTTCATCGAAACTACCTCATCCATTGAAGATCAGAGCCATTCTCTCACCACCGAGATCGCAAAAAAAGGTGTCTCTTTCGCCGTCGTCCTCTTCTTCCAGCCTCACTCACTCTCCGTCCAGAACACCTCACGCCTCCGCCGATTCGCCGCCGTACGTGACGGCGGCGTACCGCGTCACTCGTCAGCACCGTTCGCCGCCGGTAGGGTATTCTATTGGCGTCCATAACGGATCGGTGAAAGTGTGTTGCAACAATGGCCAGTTTGATGGAAGCCCTAGGTTTCTTTACCGTGGACACCACTGCAACAGTTACTGTCACTGA 600 0.505 MTLTHSHTVKLLYSYGGKILPRATDGELRYVGGYTRVLTVEFSVTFSELMAKLAELCGSSVTLRCQLPNGDFETLISITNDEDLTNIIEEYDRASSKLPHPLKIRAILSPPRSQKKVSLSPSSSSSSLTHSPSRTPHASADSPPYVTAAYRVTRQHRSPPVGYSIGVHNGSVKVCCNNGQFDGSPRFLYRGHHCNSYCH* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0620 199 SUPERFAMILY CAD & PB1 domains 25 118 - -
Lan15g0620 199 PANTHER OS05G0427100 PROTEIN-RELATED 6 199 - -
Lan15g0620 199 MobiDBLite consensus disorder prediction 113 140 - -
Lan15g0620 199 CDD PB1_UP2 14 108 - -
Lan15g0620 199 Gene3D - 29 108 - -
Lan15g0620 199 PANTHER PB1 DOMAIN PROTEIN 6 199 - -
Lan15g0620 199 MobiDBLite consensus disorder prediction 111 144 - -
Lan15g0620 199 SMART PB1_new 23 109 IPR000270 GO:0005515
Lan15g0620 199 Pfam PB1 domain 27 97 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0620 Lan-Chr15 13947612 13948675 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0620 7 96 MAP Kinase Kinase Kinase AT5G57610 47.778 6.92e-25 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0620 - - gmx:100810563 246.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g1435 1 24205374 24206706 Lan15g0620 15 13947612 13948675 PCT
Lan1g1948 1 34743713 34744748 Lan15g0620 15 13947612 13948675 PCT
Lan15g0620 15 13947612 13948675 Lan1g1435 1 24205374 24206706 PCT
Lan15g0620 15 13947612 13948675 Lan1g1948 1 34743713 34744748 PCT