Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0617 ATGTCTAGCTCTAGAAAGAAACTTCTTTTGAACAAAGTTTCTGTGAAACTAGATTGTGGAAGTTGCAGAAGACTAAAGTTGAGTCACATTTTCAACCCAAAGCCGAAACCAAAGAACCCCACTTACTCAAAAAACAAACTTTACAACCATTCCTCTTCTTCAGACAGTACCATATACACCACCCCAACAAACACTAACACCACATTCTCCCCTTGCTACATTGATTCCTCAAACTTTTCTGAGTCAGAGACTTATATGATGGCACCAAGAACAGTAGGAGGATTTGGCAGAAGTGGAAGAGAAGGTGTAGCTGTTGAGAAAGATTCTGATGACCCTTATTTGGATTTCAGGCATTCCATGCTGCAAATGATATCAGAGAATGAGATATATTCAAAAAATGATCTTAGAGAACTTCTGAACTGTTTTCTACAGCTGAACTCACCCTATCACCATGGTGCTATAGTTAGAGCTTTCACTGAGATCTGGAATGATTTTTTCTTTGTTAGGTCTAAGTCACCAAGGTTTCACTTCAACCGTAAAGCACGTGAGTTCTAA 555 0.3892 MSSSRKKLLLNKVSVKLDCGSCRRLKLSHIFNPKPKPKNPTYSKNKLYNHSSSSDSTIYTTPTNTNTTFSPCYIDSSNFSESETYMMAPRTVGGFGRSGREGVAVEKDSDDPYLDFRHSMLQMISENEIYSKNDLRELLNCFLQLNSPYHHGAIVRAFTEIWNDFFFVRSKSPRFHFNRKAREF* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0617 184 PANTHER TRANSCRIPTION REPRESSOR OFP6 1 170 - -
Lan15g0617 184 Pfam Transcriptional repressor, ovate 109 165 IPR006458 -
Lan15g0617 184 ProSiteProfiles OVATE domain profile. 105 164 IPR006458 -
Lan15g0617 184 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 103 163 IPR006458 -
Lan15g0617 184 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 1 170 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0617 Lan-Chr15 13833069 13834154 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lan15g0617 Ovate 1.4e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0617 - - mtr:MTR_7g105790 242.662