Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0611 ATGTCACAACCATGGCAAAACAACATGATGAGTCCAAATGTTTCATCAACACAAGTTGGTGACACAACCTATACTAAGATCTTTGTTGGAGGGTTGGCTTGGGAGACAAAGAGAGACACTCTCAAACTTTATTTTGATCAGTTTGGGGAGATCTTAGAGGCTGTTGTAATCACTGATAGAAACACAGGAAGATCAAAAGGATATGGCTTTGTAACATTCAAGGACCCAGATTCTGCAGTAAGAGCTTGTCATAATCCTTATCCTGTGATTGATGGAAGGAGGGCTAATTGTAATATTGCAGCTCTTGCAAGGCAGAAAATTAGTAACCCTTCATGGACTATGGTACCAACCACATTTCAGGGCACTTCTACTTATTATAACCAGCACATACCACAATATACATTTCCATATCCAGCATATAGGTATGCAAATCCTGGTTATCCTTCCCCACAAGGAATTTATGACATGCAGAACAACTATAATGTATATGGTGGCCAACAGGTTCCATTTTGGTTATTACCAACATACCATCAACCCTTTTATGGCCATAGTGGACAGTTTGTTCCAACAGCATATGTGAAAAAGACACAATTCCCTGAGATGTTACCTCAGGAGTTCACAGTTTCTGGCTTATCAGAACCTATTTTAGCTTCCCCTTCAATTCAAAGCACTGGAACAGTAGCTACTGCAGCAGGAGTGCTAGGATCCCCACAGAACAGAAACCTTCAGCTTAAGCAAATATGA 744 0.4046 MSQPWQNNMMSPNVSSTQVGDTTYTKIFVGGLAWETKRDTLKLYFDQFGEILEAVVITDRNTGRSKGYGFVTFKDPDSAVRACHNPYPVIDGRRANCNIAALARQKISNPSWTMVPTTFQGTSTYYNQHIPQYTFPYPAYRYANPGYPSPQGIYDMQNNYNVYGGQQVPFWLLPTYHQPFYGHSGQFVPTAYVKKTQFPEMLPQEFTVSGLSEPILASPSIQSTGTVATAAGVLGSPQNRNLQLKQI* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0611 247 SMART rrm1_1 26 98 IPR000504 GO:0003723
Lan15g0611 247 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 25 102 IPR000504 GO:0003723
Lan15g0611 247 PANTHER BOULE-RELATED 1 233 IPR037366 GO:0003729
Lan15g0611 247 CDD RRM_RBM24_RBM38_like 25 100 - -
Lan15g0611 247 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 27 82 IPR000504 GO:0003723
Lan15g0611 247 Gene3D - 1 110 IPR012677 -
Lan15g0611 247 PANTHER RNA-BINDING (RRM/RBD/RNP MOTIF) FAMILY PROTEIN 1 233 - -
Lan15g0611 247 SUPERFAMILY RNA-binding domain, RBD 3 107 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0611 Lan-Chr15 13740708 13742559 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0611 21 101 C2H2 Transcription Factor Family AT2G19380 41.975 4.33e-15 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0611 - - gmx:100788634 351.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0611 15 13740708 13742559 Lan15g0611 15 13740708 13742559 ECH