Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0605 ATGGCGTCGATGCCACTTTCTTTCTCTTACGATGTTTCCTCTCCCCCATTAGATGAAGACGACGTAGCATTCCACCAAACCCTCGCAGAAGTTCTTCATGGAGATTATTTCTTCATCAAGATCCATGTTACGTATCGAATTTTATGTTTAACTCGTGCACAATTACAACAGTTACCAGAAGATATTGATTATTATGAGTCTTCATATCGCACTGTCAAGCTTGTTTCATACCCAGAGCTCTTGGAATGTGATTTGTTCTCGGGCATTCCTGATGCTATCGTCCCACTTGAGTTGAAGCAAACAATGATATCAGAAGCGATGTCACACGCAAGAAATCTGCGTGAAAGTTCTTGTAGTGATTCCAATGGTGAAAGGAGTGGTTGTCGTTTGTTCAACTTGGTTTTGGATATTGATGTTGATGGATTATATGATGAGGTTGTGAATATGGCTATGGAAGAGTCTGAGGGAGAAGTAAAAATGGTTCCAGCATCAAAGAATGCCATTGATTCACTCAAGAAAGTGAATCTTGGAAAAGATATTGCCAAGGAAGAGTGCAGTATTTGTTTGGTGGAATTTATTGGGGAAGAGGAGGTTTCTGAAATGCCCTGCAAGCATATGTATCATCAAGAATGCATCACCCAGTGGCTTCGAAGGAGTGGCATGTGTCCCTTGTGTCGTTATTCAATGTCCAAAAACAGCAGTTGA 705 0.4099 MASMPLSFSYDVSSPPLDEDDVAFHQTLAEVLHGDYFFIKIHVTYRILCLTRAQLQQLPEDIDYYESSYRTVKLVSYPELLECDLFSGIPDAIVPLELKQTMISEAMSHARNLRESSCSDSNGERSGCRLFNLVLDIDVDGLYDEVVNMAMEESEGEVKMVPASKNAIDSLKKVNLGKDIAKEECSICLVEFIGEEEVSEMPCKHMYHQECITQWLRRSGMCPLCRYSMSKNSS* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0605 234 CDD RING-H2_PA-TM-RING 184 226 - -
Lan15g0605 234 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 115 229 - -
Lan15g0605 234 SMART ring_2 185 225 IPR001841 -
Lan15g0605 234 Pfam Ring finger domain 184 226 IPR001841 -
Lan15g0605 234 ProSiteProfiles Zinc finger RING-type profile. 185 226 IPR001841 -
Lan15g0605 234 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 148 232 IPR013083 -
Lan15g0605 234 PANTHER F6A14.12 PROTEIN-RELATED 115 229 - -
Lan15g0605 234 SUPERFAMILY RING/U-box 184 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0605 Lan-Chr15 13664225 13664954 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0605 162 229 C3H Transcription Factor Family AT1G26800 51.471 6.52e-17 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0605 - - lang:109327711 475.707