Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0604 ATGGGTTCCAGTGAGTTGGCATGCTCCTACGCCACCTTGATCCTCCACGACGAGGAAATCCCAATCACCGCGGAGAAGATTTCCACTGTGTTGAAGGCTGCTAACGTGAACGTTGAGTCATACTGGCCAAGTTTGTTTGCCAAGCTTGCTCAGAAGAGGAACATTGATGATCTCATCTTGAATTCCGGTGGAGGCGGTGCAGCTGTTGTTGCCGTCGCTGCCCCCGCTGCTGCTGCCGGTGGTGGTGCCGCCGCCGCCGCTCCAGCTGCTGTGGAGAAGAAGGAAGAGGCCAAGGAAGAAAGTGACGATGACATGGGTTTCAGCTTGTTCGATTAG 336 0.5506 MGSSELACSYATLILHDEEIPITAEKISTVLKAANVNVESYWPSLFAKLAQKRNIDDLILNSGGGGAAVVAVAAPAAAAGGGAAAAAPAAVEKKEEAKEESDDDMGFSLFD* 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0604 111 Pfam 60s Acidic ribosomal protein 22 110 - -
Lan15g0604 111 MobiDBLite consensus disorder prediction 91 105 - -
Lan15g0604 111 PRINTS Ribosomal protein P2 signature 25 36 IPR001859 GO:0003735|GO:0005840|GO:0006412
Lan15g0604 111 PRINTS Ribosomal protein P2 signature 83 97 IPR001859 GO:0003735|GO:0005840|GO:0006412
Lan15g0604 111 PRINTS Ribosomal protein P2 signature 98 109 IPR001859 GO:0003735|GO:0005840|GO:0006412
Lan15g0604 111 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P1-1-RELATED 1 111 - -
Lan15g0604 111 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P1 1 111 - -
Lan15g0604 111 MobiDBLite consensus disorder prediction 89 111 - -
Lan15g0604 111 Gene3D - 2 63 IPR038716 -
Lan15g0604 111 CDD Ribosomal_P1 5 61 - -
Lan15g0604 111 Hamap 50S ribosomal protein L12 [rpl12]. 6 111 IPR027534 GO:0003735|GO:0005840|GO:0006414
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0604 Lan-Chr15 13660662 13662566 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0604 1 111 Cytoplasmic Ribosomal Protein Gene Family AT5G24510 58.772 3.18e-40 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0604 K02942 - mnt:21402570 128.642
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0604 15 13660662 13662566 Lan15g0604 15 13660662 13662566 ECH