Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0589 ATGCAGAAGATGTCTATACAATATGAAAACTCTGATATTAAAGGTGCACCAGATCCACAAAAAAGACTAACAATTCTGATGCATCAAGCTGGGAACAACTTTTGTGCTGATTGTGGAACTCCAGAGCCAAAATGGGTATCTTCCAGTTTTGGAGTATTTATTTGCATCAAGTGTTCTGGAATACACAGAAGCCTAGGATCACACATATCAAAGGTTCTATCACTGAAGTTAGATGAATGGACAGATGAACAAGTTGATGCATTGGCAATGTTGGGAGGAAATAGAATACTAAGTAAGAAGTATGAAGCTTGCATCCCAAGTTACATAAAAAAACCAAAATCACATTCCTCCATTGAAGAGCGCTCGGATTTTATTAGGAGAAAATATGAGCATCTACAATTTCAGGAGTGTGATGACCATTCGCCGTGCCCAATCATACCATATCAAGGAAGAAGTTCATCATTAGCTCAGAGCAGTTCTTCATGCAACAATTCTCTTCCTGACAAGAATCCATATGACAAACAACCAACCAAAAACTGCATCGGACATGCATTTCGAAACAGCTGGGGAAGAAAAGATTCTGAGCATAAGTCTTCTTCAAAGAAGAGCACCTCATTGGCAGGTATGGTTGAATTTGTTGGATTGATAAAGGTTAATGTTGTTAAAGGCACTAATCTTGCGGTCCGGGATGTAATGACTAGTGACCCTTATGTCATCCTTTCTTTGGGTCACCAATCAGTAAAAACACGTGTTATAAAGAACAATTTGAATCCAGTTTGGAATGAAAGCCTAATGCTGTCTATTCCAGAGAACATTCCTCCTCTTAAAGTGCTTGTGTATGATAAGGATACATTTTCAACTGATGATTACATGGGTGAGGCTGAAATAGATATTCAACCTCTAGTTTTAGCTGCAAAAGCCTATGAAAAATCTACAATTAATGAGCCTATGCAGCTTGGAAAATGTATAGCAAGCAAGGACAACACTCTTATTAGAGATGGTGTAATATCCCTTGATGAAGGGAAGATCAAACAGCAAATCTCAGTGAAGTTACAACATGTTGAGAGAGGTGTTCTTGAAGTTGAACTTGAGTGTGTTCCTCTTACTCAATAG 1113 0.3827 MQKMSIQYENSDIKGAPDPQKRLTILMHQAGNNFCADCGTPEPKWVSSSFGVFICIKCSGIHRSLGSHISKVLSLKLDEWTDEQVDALAMLGGNRILSKKYEACIPSYIKKPKSHSSIEERSDFIRRKYEHLQFQECDDHSPCPIIPYQGRSSSLAQSSSSCNNSLPDKNPYDKQPTKNCIGHAFRNSWGRKDSEHKSSSKKSTSLAGMVEFVGLIKVNVVKGTNLAVRDVMTSDPYVILSLGHQSVKTRVIKNNLNPVWNESLMLSIPENIPPLKVLVYDKDTFSTDDYMGEAEIDIQPLVLAAKAYEKSTINEPMQLGKCIASKDNTLIRDGVISLDEGKIKQQISVKLQHVERGVLEVELECVPLTQ* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0589 370 Pfam C2 domain 215 302 IPR000008 -
Lan15g0589 370 Gene3D Arf GTPase activating protein 3 141 IPR038508 -
Lan15g0589 370 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12 18 370 IPR044518 GO:0005096|GO:0005543
Lan15g0589 370 Gene3D C2 domain 213 369 IPR035892 -
Lan15g0589 370 PRINTS HIV Rev interacting protein signature 32 51 IPR001164 GO:0005096
Lan15g0589 370 PRINTS HIV Rev interacting protein signature 51 68 IPR001164 GO:0005096
Lan15g0589 370 PRINTS HIV Rev interacting protein signature 72 93 IPR001164 GO:0005096
Lan15g0589 370 SMART arf_gap_3 20 142 IPR001164 GO:0005096
Lan15g0589 370 SMART C2_3c 215 310 IPR000008 -
Lan15g0589 370 MobiDBLite consensus disorder prediction 151 179 - -
Lan15g0589 370 ProSiteProfiles ARF GTPase-activating proteins domain profile. 20 142 IPR001164 GO:0005096
Lan15g0589 370 CDD C2_ArfGAP 213 357 - -
Lan15g0589 370 Coils Coil 368 370 - -
Lan15g0589 370 MobiDBLite consensus disorder prediction 151 172 - -
Lan15g0589 370 ProSiteProfiles C2 domain profile. 197 312 IPR000008 -
Lan15g0589 370 Pfam Putative GTPase activating protein for Arf 21 136 IPR001164 GO:0005096
Lan15g0589 370 PANTHER CALCIUM-DEPENDENT ARF-TYPE GTPASE ACTIVATING FAMILY PROTEIN 18 370 - -
Lan15g0589 370 SUPERFAMILY ArfGap/RecO-like zinc finger 20 134 IPR037278 -
Lan15g0589 370 CDD ArfGap 23 129 - -
Lan15g0589 370 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 211 305 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0589 Lan-Chr15 13315328 13320457 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0589 6 370 C2H2 Transcription Factor Family AT4G21160 45.753 3.38e-113 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0589 K12486 - gmx:100789552 577.785