Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0585 ATGTCTCCAGGTCCAGTTGTTGAACCCGCCGCCGTGGCCGGAGCCGAACAAGAACTCTTCTCTCCCGCCGAGGAAACTACTCTCAAGAAGAAACCTCTGCCTCAGGAGGATGATGCTCCTGTTGTTGAAGACGTGAAGGATGAAGCTGAAGACGATGAAGATGACGAGGATGATGATGATGAGGATGATGGTGCTCAAGGTGATATTGAGGGTTCAAAACAAAGCAGAAGTGAGAAGAAGAGTCGAAAAGCAATGTTGAAGCTGGGACTAAAACCTGTTACTGGTGTTAGTAGGGTCACGATCAAGAGAACAAAAAATGTTCTCTTTTTCATCTCAAAGCCCGATGTCTTCAAGAGTCCAAATTCTGAGACCTACGTCATATTTGGAGAGGCAAAGATAGAGGACTTGAGCTCTCAGTTGCAGAACCAAGCTGCTCAGCAGTTCAGGATGCCAGACCTGCAATCTCTAACGGCAAAACAAGATCAAGGTGCTGCAGCGGCAGGAGCACCAGCTGATGAGGAAGAAGAGGAGGTTGACGAAACTGGTGTGGCTCCCCACGACATTGATTTGGTCATGACACAGGCAGGAGTGTCAAGAAGCAAGGCTGTTAAGGCTCTCAAGACTCACGATGGTGACATTGTTGGTGCTATCATGGAGCTCACCACTTAG 669 0.4843 MSPGPVVEPAAVAGAEQELFSPAEETTLKKKPLPQEDDAPVVEDVKDEAEDDEDDEDDDDEDDGAQGDIEGSKQSRSEKKSRKAMLKLGLKPVTGVSRVTIKRTKNVLFFISKPDVFKSPNSETYVIFGEAKIEDLSSQLQNQAAQQFRMPDLQSLTAKQDQGAAAAGAPADEEEEEVDETGVAPHDIDLVMTQAGVSRSKAVKALKTHDGDIVGAIMELTT* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0585 222 MobiDBLite consensus disorder prediction 1 84 - -
Lan15g0585 222 Gene3D - 84 137 IPR038187 -
Lan15g0585 222 SMART NAC_2 78 134 IPR002715 -
Lan15g0585 222 Pfam NAC domain 78 133 IPR002715 -
Lan15g0585 222 Gene3D - 183 220 - -
Lan15g0585 222 MobiDBLite consensus disorder prediction 41 66 - -
Lan15g0585 222 MobiDBLite consensus disorder prediction 157 185 - -
Lan15g0585 222 PANTHER NASCENT POLYPEPTIDE ASSOCIATED COMPLEX ALPHA SUBUNIT-RELATED 26 221 IPR016641 GO:0005854
Lan15g0585 222 CDD UBA_NAC_euk 185 221 - -
Lan15g0585 222 MobiDBLite consensus disorder prediction 67 84 - -
Lan15g0585 222 Pfam HYPK UBA domain 182 221 IPR044034 -
Lan15g0585 222 ProSiteProfiles NAC A/B domain profile. 75 140 IPR002715 -
Lan15g0585 222 MobiDBLite consensus disorder prediction 23 40 - -
Lan15g0585 222 PANTHER NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 2 26 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0585 Lan-Chr15 13257377 13260066 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0585 K03626 - gmx:100779560 241.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0585 15 13257377 13260066 Lan15g0585 15 13257377 13260066 ECH
Lan15g0585 15 13257377 13260066 Lan3g0776 3 14455505 14462150 LSH