Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0565 ATGGATATAGACAATCCTTTTGAGTATGACACTGGTGAGAATGGTGGCTTTTACGAAACTTCCCTCTTAGAGATGTATGATCTTGAGCAAGTGGCGAAATGGACTGAGAGGATCCTGCCTTTCTTGCTGCTGTTGTTAGCTGTTTTCCTTCGAGAGCATTTCCAAGGAGTCTTTGTCATGATGTTTACATCTTTTGTGCTGTTCAAATCTAATGACATTGTTAAGAAGCAGACAGCTCTAAAGGAAGATCGAAGAGCGTTAGTTCTTGCTGGTTTCTCTTCTGCCTCCATGTTGTATGTGATATGCATTTACTGGTTGTATCGCAATGATGATCTTGCATACCCACTTATCATGTTTCCTCTTAAAGAAACACCATCTTTATGGCATGCACTGTTTACCATTTTGGTTAATGATACATTAGTGCGGCAAGCAGCAATGGCTTTGAAGTGTATGTTGCTTATTTCCTTCAAAAATTGCAGACGCAATAACTTCCTTTGGCAGGGTAAAATGTTAACTCTGGTTGAGCACACACTGCTGTTATATCGTTCCTTGTTGCCGATTTCTGTTTGGAACACATTTTTCATGAACAAGGATTATGGGACTTTGTTTTCATTAGTGATGATAGGGTTATATTTAACCTTCAAGCTATCATATGCACTTGAGAAGGTCCGATGCTTCTTTTATGCTTTAAAATCGTTATCAGAAAGGGAATCTCTTAATAGTATTTATTCGACAACGGACCAGGTAAATGATGCTGGTGACTTGTGTGCTATATGCCATGAGAGGATGTATGCTCCTACTCAGTTGTTGTGTAAACACATTTTCTGCGAGGACTGTGTGTGTCAATGGTTTGAGAGGAAAAATACTTGTCCATTATGCAGGGCAGTTATGTCAACGCCGCCTCTGACGACATTTAGAAGCGGATCAACAAGTCTGTTTTACCAGTTCTGTTAG 954 0.3983 MDIDNPFEYDTGENGGFYETSLLEMYDLEQVAKWTERILPFLLLLLAVFLREHFQGVFVMMFTSFVLFKSNDIVKKQTALKEDRRALVLAGFSSASMLYVICIYWLYRNDDLAYPLIMFPLKETPSLWHALFTILVNDTLVRQAAMALKCMLLISFKNCRRNNFLWQGKMLTLVEHTLLLYRSLLPISVWNTFFMNKDYGTLFSLVMIGLYLTFKLSYALEKVRCFFYALKSLSERESLNSIYSTTDQVNDAGDLCAICHERMYAPTQLLCKHIFCEDCVCQWFERKNTCPLCRAVMSTPPLTTFRSGSTSLFYQFC* 318
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0565 317 ProSitePatterns Zinc finger RING-type signature. 271 280 IPR017907 -
Lan15g0565 317 Pfam Zinc finger, C3HC4 type (RING finger) 256 293 - -
Lan15g0565 317 ProSiteProfiles Zinc finger RING-type profile. 256 294 IPR001841 -
Lan15g0565 317 SUPERFAMILY RING/U-box 255 300 - -
Lan15g0565 317 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 21 316 - -
Lan15g0565 317 PANTHER UNCHARACTERIZED RING FINGER-CONTAINING PROTEIN 21 316 IPR044235 GO:0061630|GO:1904294
Lan15g0565 317 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 229 312 IPR013083 -
Lan15g0565 317 SMART ring_2 256 293 IPR001841 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lan15g0565 Lan-Chr15 12973406 12978847 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0565 10 315 C3H Transcription Factor Family AT5G01960 57.190 1.02e-128 372