Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0560 ATGAGTAGTACTATTTTCCCTGAAAGTGTCTTATCCAATAGAAAGAGGGTAATAAGAGAACTTCTTCAGGGTCATGAATGTGCTACTAAGCTTAAGTTTCTGCTTCACAACCCTAATGCCTCTGATGGGTTTTTCTCAGCTAAAGAACTTTTGGCTAATGTGCTGAGATCTTTCACTGAGACTATTTCTGTGCTCACATCTTCTTATGACATTGAAGCTTCTGATGAGGTTGCACAGATTGTTAATTCTGGAGAAAATGGATCACAGGTGGGTGCTAATTCCAGCAATGATATCAGGTCTGAAGATTCAAGTGAGGGTAGGAAGAGAACGTTGGCCACCACCATGAAGGGTCGAAGAGGTTCATATAAAAGAAGGACGACTCAACAAACATGGAACAAAGTCTCAGAAACTATTGATGATAATCATGCATGGAGAAAGTATGGGCAGAAGGAGATACTGAATTCTAAATTCCCCAGGAGTTACTTCAGGTGCTCTAAGAAGTATGATCAAGGTTGCCGTGCAAAGAAACAGGTGCAACGAGTACAAGAGAATCCAGACATGTACCATACTACGTACATTGGCATACACACATGCAAAGACACCCTCAAGGATCCACAAATGATCACATATTCTGATACTTTGGACTCAACTCTTATGAACTCCAATTCTGACTCAAAGGTGCCAAATGAAAAAGATCCTTCTATTTGCTCACGAATTCCAGTTATAAAACAAGAATATCACAAACAAGACATGCCAAGTGATCTTATAGACAACTTGGATTCTACCCTGTGGTCTGATTTGAAGGATTTTGAACAATACAAGTCTGTTATTGTGCCCTCAAAGATGAAATCTCATAATGCAGATAATGTGTATTCATGTACTGATTTTCAAAGCCTGGACAATGATTTTGGGGTACTTTCTTCTCCTTTCAGCACTGACTTCCACTTTGTTGAAAGCCATTTGCTTTGA 969 0.3942 MSSTIFPESVLSNRKRVIRELLQGHECATKLKFLLHNPNASDGFFSAKELLANVLRSFTETISVLTSSYDIEASDEVAQIVNSGENGSQVGANSSNDIRSEDSSEGRKRTLATTMKGRRGSYKRRTTQQTWNKVSETIDDNHAWRKYGQKEILNSKFPRSYFRCSKKYDQGCRAKKQVQRVQENPDMYHTTYIGIHTCKDTLKDPQMITYSDTLDSTLMNSNSDSKVPNEKDPSICSRIPVIKQEYHKQDMPSDLIDNLDSTLWSDLKDFEQYKSVIVPSKMKSHNADNVYSCTDFQSLDNDFGVLSSPFSTDFHFVESHLL* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0560 322 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 7 305 IPR044810 GO:0003700
Lan15g0560 322 MobiDBLite consensus disorder prediction 84 99 - -
Lan15g0560 322 SUPERFAMILY WRKY DNA-binding domain 136 199 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan15g0560 322 Pfam WRKY DNA -binding domain 139 199 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan15g0560 322 SMART WRKY_cls 138 200 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan15g0560 322 PANTHER WRKY DNA-BINDING TRANSCRIPTION FACTOR 70 7 305 - -
Lan15g0560 322 MobiDBLite consensus disorder prediction 84 109 - -
Lan15g0560 322 ProSiteProfiles WRKY domain profile. 133 196 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan15g0560 322 Gene3D WRKY domain 123 200 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0560 Lan-Chr15 12897837 12905034 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0560 12 228 WRKY Transcription Factor Family AT3G56400 42.396 9.06e-48 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lan15g0560 WRKY 2.7e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0560 - - gmx:100170683 340.502