Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0559 ATGGAACATGTTATTACTTCTATTCACCATGCTTGTGCATTAGCTCAAAGCCTTGAATCAGGCCTACCCAACTTGGCCAACCAACCTGCTAGATTATGCTTGTCCATTAATGAAATTGTTAAGACATTGAGTGATGCAAAAGAAAGGCTAATGATATTGTCCCAACATGACCAAACACCATTATCTTCCTTTGCTCAGTTGATGATGATGCCTCATGAAATGCATCATCAGCCTCAGATGGATGCAATTTCAATGCAGGAATGGATCAGCTGTAGTTATACACAGACAACGGATCAGTTGCTTCAAGCTGCGATGAGCTCAATACCACTTGATGTGCGAACTTTGCCTGAAACTAAGATGATTATGGGTATGGAGGCAATGGAAGCATCACCCTCACGATCAAGAAAAAGCAGGAAAGTTGATCTTGAGAAGAGAACAATAATGGTTCCTGCACCACAGTTTGGAAACACAGAGATGCCACCGGAGGATGGCTTCACTTGGAGAAAATATGGCCAGAAAGAGATACTTGGCTCCAAGTATCCAAGGTGTTACTACAGGTGTACACACCAGAAATTATATGGATGCCTAGCAAAGAAGCAAGTGCAACGACATAATGATAATCCTAGCATGTACGAGGTAACATACAGAGGTAACCACACTTGTCATATGTCCTCAACAGCACCATTATCAATTCCACCACAACAACTACTACTGGACGTTACACAAAGAACCATTTCCCCTCAGTTGTCTCCAACAACAGCTTCAGCTTCCAGCATGTGGTTGTCCTCTATTAACGTCGGCCTCCAGCAGGGTGGTGGCGGTGGTATGGCTCCAGCTGCGGCCGGTGCCAGTGATGGGCCATCAACTTCTAGAGATGGTGCTGATTATCCTGTGGTGGATATGGCTGATGTTATGTTCAATAATGGTAGCAGCAGTGGTAATAGTATAGAATCTCTCTTCCCTCCTACTGAAGATAATTAG 981 0.4393 MEHVITSIHHACALAQSLESGLPNLANQPARLCLSINEIVKTLSDAKERLMILSQHDQTPLSSFAQLMMMPHEMHHQPQMDAISMQEWISCSYTQTTDQLLQAAMSSIPLDVRTLPETKMIMGMEAMEASPSRSRKSRKVDLEKRTIMVPAPQFGNTEMPPEDGFTWRKYGQKEILGSKYPRCYYRCTHQKLYGCLAKKQVQRHNDNPSMYEVTYRGNHTCHMSSTAPLSIPPQQLLLDVTQRTISPQLSPTTASASSMWLSSINVGLQQGGGGGMAPAAAGASDGPSTSRDGADYPVVDMADVMFNNGSSSGNSIESLFPPTEDN* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0559 326 Gene3D WRKY domain 151 224 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan15g0559 326 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 2 252 IPR044810 GO:0003700
Lan15g0559 326 MobiDBLite consensus disorder prediction 272 295 - -
Lan15g0559 326 Pfam WRKY DNA -binding domain 162 221 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan15g0559 326 SUPERFAMILY WRKY DNA-binding domain 158 223 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan15g0559 326 SMART WRKY_cls 161 223 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan15g0559 326 MobiDBLite consensus disorder prediction 307 326 - -
Lan15g0559 326 ProSiteProfiles WRKY domain profile. 162 224 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan15g0559 326 PANTHER WRKY TRANSCRIPTION FACTOR 55 2 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0559 Lan-Chr15 12888096 12891180 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0559 1 324 WRKY Transcription Factor Family AT2G40740 37.685 1.82e-57 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lan15g0559 WRKY 4.9e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0559 - - gmx:100792150 327.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0559 15 12888096 12891180 Lan14g0551 14 11703144 11705600 LSH