Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0555 ATGTCCTCAGAGGACATAGAAAACGGTCTCAACTCACCGCTCGTATTCCAAGACGCCGTTTTACGATTCAATTCTGGGCCACCACCTCGCCGCATCGACGACCCGCTTCCGAAAACCCGAGAACCCTCCGTTTTCGTCGACGAAAAGATGTTCGCTATGGATCGTGACCGGTTCTTCGCGGCGCAGGGCGCCGAGTTTCGCCGCAACGTCTACGGCGATTGCTCCGGCCAACGTGACACTCCGGATGGCCGAAATTGGAGCAGGAATGGAAGTAGCGGCGATGATTCGGATGATTCAGAGGATGATGAAGATGATGATATTGATGATGATGTTGAAGGTGAAGTAGAAGATCTCATTGGTAACAAGCGCAATTCCAACGCAATTGGTGAAATTAACAATAACAGTGGCAGTGGTGGTAATTTGGCTATTGTTGCAAATGGGAAAACTCAGCACCAATCCCCTTATGTTTGTGGAAGAGAGTTGTTGGGGAAGGATGGTGAAATTGGGCATTTAGGGCATAACAGTGTGAGTGGTGGTGATGAAGATCATCAAAGAGAAAGGTTGGGTAAGTCTCAAAATGCTGTCGTTGTTGCTGAAACTGAGTGTGAGGAGTACTATTCTCAGTATCTTCATGGGACAGAAGGGTCAGGTTCTGTTCAGAAAGTAATGGTAGATGAGAATGGATGTGGATTTAGTGGGAGAAAAGATGCTATGTATCCGGGCGAGTCGGGGGAGTCTTTGAGGGCAATCCTTTCAGATACTGTCACGGGAGCTCTTATGGATGATGCAATGATATTACCTTGTGGACATTCATTTGGCGGAGGTGGAATACAGCATGTTATAAGAATGAAAGCTTGCTGCACTTGTTCTCAACCAACAACTGAGGAATCAATATCTCCAAACTTATCACTACGAGCTGCTGTTCAGGCATACTGTCGAGAAGAGGAGTCACAATTTTACCGGGCATCCAAAAGAAGAAGAGAAAGATTTGATCAGGGTGGTTTTGGAGATTCAGCTGTTATGGAACCATCAAGGAGTAGAGGTGTTCAATTTCCATTTGCTGTGATGGACCGGGTTGTCATAAAGGGAAATAAAAGGACACCACAACGCTTTGTTGGTCGTGAAGCTATTGTAACTACACAATGCCTGAATGGATGGTATGTAGTCAAGACACTGGATAATGCAGAGAGTGTAAAGTTGCAGTATCGTTCCCTTGCTAAGGTTTTGGATGATCCTTCAAAACCTGTCTCCAGCAAGGTGGGACCTAATTGGCTTTAG 1278 0.4601 MSSEDIENGLNSPLVFQDAVLRFNSGPPPRRIDDPLPKTREPSVFVDEKMFAMDRDRFFAAQGAEFRRNVYGDCSGQRDTPDGRNWSRNGSSGDDSDDSEDDEDDDIDDDVEGEVEDLIGNKRNSNAIGEINNNSGSGGNLAIVANGKTQHQSPYVCGRELLGKDGEIGHLGHNSVSGGDEDHQRERLGKSQNAVVVAETECEEYYSQYLHGTEGSGSVQKVMVDENGCGFSGRKDAMYPGESGESLRAILSDTVTGALMDDAMILPCGHSFGGGGIQHVIRMKACCTCSQPTTEESISPNLSLRAAVQAYCREEESQFYRASKRRRERFDQGGFGDSAVMEPSRSRGVQFPFAVMDRVVIKGNKRTPQRFVGREAIVTTQCLNGWYVVKTLDNAESVKLQYRSLAKVLDDPSKPVSSKVGPNWL* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0555 425 MobiDBLite consensus disorder prediction 71 137 - -
Lan15g0555 425 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 247 316 IPR013083 -
Lan15g0555 425 MobiDBLite consensus disorder prediction 95 115 - -
Lan15g0555 425 ProSiteProfiles U-box domain profile. 246 318 IPR003613 GO:0004842|GO:0016567
Lan15g0555 425 SUPERFAMILY RING/U-box 248 318 - -
Lan15g0555 425 MobiDBLite consensus disorder prediction 22 42 - -
Lan15g0555 425 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 62 77 425 - -
Lan15g0555 425 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 62-RELATED 77 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0555 Lan-Chr15 12766217 12770014 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0555 191 425 Plant U-box Gene Family AT5G05230 60.744 8.86e-91 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0555 - - adu:107470194 608.986