Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0540 ATGTCTGCAATGAACTCTAGTGTATTGGCTTGTAGCTATGCCATAACTAGTGCAGGATGTTCTGACCTCAATGCAAAGCTTACTTCCGTGCCAGTCCCTGGTTACAAGTTGCCTATGATCAAGGCTCAGCAGGCTAGATTTCCCCAAGCCAAAGAATCTCAAGCAAGTGAAGGAAGGAGAGGTGCCCTTGTTTTATTGGCAGCTACCCTGTTCACCACTGCAGCTGCAGCCTCCAACACTTCTTTTGCCAATGCTGGGGTCATTGAAGATTACCTTGAAAAGAGCAAGGCCAACAAGGAACTGAATGACAAGAAGAGGTTAGCTACTAGTGGAGCAAACTTTGCTAGAGCATACACTGTTCAATTTGGCACTTGCAAGTTCCCTGAGAACTTCACTGGTTGCCAAGATCTTGCCAAACAAAAGAAAGTGCCATTCATTTCTGATGATTTGGAGCTTGAATGCGAAGGAAAGGACAAATACAAGTGCGGTTCTAATGTTTTCTGGAAATGGTGA 513 0.4483 MSAMNSSVLACSYAITSAGCSDLNAKLTSVPVPGYKLPMIKAQQARFPQAKESQASEGRRGALVLLAATLFTTAAAASNTSFANAGVIEDYLEKSKANKELNDKKRLATSGANFARAYTVQFGTCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0540 170 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT N, CHLOROPLASTIC 1 170 IPR008796 GO:0009522|GO:0015979
Lan15g0540 170 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT N, CHLOROPLASTIC 1 170 - -
Lan15g0540 170 Pfam Photosystem I reaction centre subunit N (PSAN or PSI-N) 38 170 IPR008796 GO:0009522|GO:0015979
Lan15g0540 170 Gene3D - 86 170 IPR044907 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0540 Lan-Chr15 12558293 12559506 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0540 1 141 Calmodulin-binding Proteins AT5G64040 62.838 9.64e-56 172