Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0531 ATGATGAGAAAACCCAATAAACCCATCTCCATCTCAATCTCAAGATCCACCACCTTCATCCTCATTCTCTCCATGACTTCTCTTCTCTCCCTCTCTCTCCTCTTCTTTCTCTCCCTCTCTCCCATTCTCTCCCAACAACCACCTTCTCTACTCATCCAACAAGCATGCAAGGCCACGCGCTTCCCTCACCAATGCATTTCCACGCTCTCTCAATCCACCCTCCCTTTTACTCCTATCAATTTCATCCATTCCGCCACGTCAGCAACCATCCACAATCTCCACATTGCTCAATCAATGCTCAATTCCCTCCTCTCCTCTTCCCCCAATGCCGCTGAAACCTGTCTCCAGATACTGCACTACTCCCATCACCGCACTTCCCTCGCCGCGGACGCGCTCGCGCGAGGCCGAATAAAGGACGCTCGCGCGTGGATGTCCGCGGCGTTGGCTTACCAGTACGGGTGCTGGTCAGGGTTAAAATATGTTAACAACACTGAATTGGTATCCAAAACGATGTTGTTTCTTGACAACCTTGTATCTCTCACCAGCAATGTTCTCAGCATGATTGTCTCGTATGATGTATATGGAAACGACACCGTCTCGTGGACACCGCCTCGAACGGAACGAGACGGTTTCTGGGAGCCAGCATTGGGTTCGGGTTCAGAATTCCGAGCTGGGATACCGGTTTTGAAAGTTGATGCTGTGGTGTGTAAGGGTGAGGGGAGAGGGTGTTATAGGACGGTGCAGGAAGCGGTTAACGCGGCGCCGGAGAGGGCGGTGGGTGAGAGAGGGAGGTTTGTGATACACATAAGGGAAGGGGTTTATGAAGAGAGGGTTAGGGTTCCGTTGAAGAAGAGGAATGTGGTGTTTTTGGGTGATGGAATGGGGAAGACTGTGATAACGGGTTCTGCTAGCGTGGGGCTGCAGCCTGGGATGACAACTTACAATTCTGCCACTGTAGGGGTTGATGGGGATGGATTCATGGCAAAGGATCTTACAATTCAAAACACAGCCGGTCCAAATGCACACCAAGCAGTAGCATTCAGGTCAGACAGTGATCTCTCTGTGATTGAGAATTGTGAATTCATAGGCAATCAAGATACTGTATATGCTCATTCCCTGCGCCAATTCTACAAATCATGTCGTATCATTGGCAATGTAGACTTCATCTTTGGAAACTCGGCTTCAATCTTCCAAGACTGCCAAATCCTAGTCGGGCCCAGGCAAGCCAAGCCAGAAAAGGGTGAAAGCAATGCGATAACGGCACATGGCAGGACAGACCCTGCTCAATCAACAGGCTTTGTTTTCCGCAACTGCTTGGTTAATGGAACTGAGGAATATATGGCATTGTATTATAGCAAGCCTAAAGTACACAAGAACTATCTTGGCAGGCCTTGGAAGGAGTATTCAAGAACAGTTTTCATTCATTCTTTATTGGAAGCTCTTATCACGCCACAGGGTTGGATGCCATGGGGTGGTGGTGACTTTGCACTGAAGACACTTTACTATGGGGAATTTGAGAACTCTGGACTTGGTTCTAATTTGACTCAGAGAGTGCCCTGGAGTAGCAAGGTCCCGGCTGAGCACGTGTTTTCGTATTCAGTGCAGAGTTTCATTCAAGGGGATGATTGGATTCCATCATCTCAGTAA 1647 0.4888 MMRKPNKPISISISRSTTFILILSMTSLLSLSLLFFLSLSPILSQQPPSLLIQQACKATRFPHQCISTLSQSTLPFTPINFIHSATSATIHNLHIAQSMLNSLLSSSPNAAETCLQILHYSHHRTSLAADALARGRIKDARAWMSAALAYQYGCWSGLKYVNNTELVSKTMLFLDNLVSLTSNVLSMIVSYDVYGNDTVSWTPPRTERDGFWEPALGSGSEFRAGIPVLKVDAVVCKGEGRGCYRTVQEAVNAAPERAVGERGRFVIHIREGVYEERVRVPLKKRNVVFLGDGMGKTVITGSASVGLQPGMTTYNSATVGVDGDGFMAKDLTIQNTAGPNAHQAVAFRSDSDLSVIENCEFIGNQDTVYAHSLRQFYKSCRIIGNVDFIFGNSASIFQDCQILVGPRQAKPEKGESNAITAHGRTDPAQSTGFVFRNCLVNGTEEYMALYYSKPKVHKNYLGRPWKEYSRTVFIHSLLEALITPQGWMPWGGGDFALKTLYYGEFENSGLGSNLTQRVPWSSKVPAEHVFSYSVQSFIQGDDWIPSSQ* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0531 548 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 51 188 IPR035513 -
Lan15g0531 548 CDD PMEI-like_3 55 188 - -
Lan15g0531 548 TIGRFAM PME_inhib: pectinesterase inhibitor domain 28 187 IPR006501 GO:0004857
Lan15g0531 548 Pfam Pectinesterase 233 541 IPR000070 GO:0030599|GO:0042545
Lan15g0531 548 Pfam Plant invertase/pectin methylesterase inhibitor 51 187 IPR006501 GO:0004857
Lan15g0531 548 Gene3D Invertase/pectin methylesterase inhibitor family protein 50 190 IPR035513 -
Lan15g0531 548 Gene3D - 229 548 IPR012334 -
Lan15g0531 548 SUPERFAMILY Pectin lyase-like 232 546 IPR011050 -
Lan15g0531 548 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 44 546 - -
Lan15g0531 548 PANTHER PECTINESTERASE 44 546 - -
Lan15g0531 548 SMART PMEI_2 47 187 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0531 Lan-Chr15 12350789 12353749 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0531 40 543 Carbohydrate Esterase AT5G09760 64.355 0.0 665
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0531 - - gmx:100802102 761.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0684 12 13648227 13651453 Lan15g0531 15 12350789 12353749 PCT
Lan1g1565 1 26367963 26371756 Lan15g0531 15 12350789 12353749 PCT
Lan15g0531 15 12350789 12353749 Lan12g0684 12 13648227 13651453 PCT
Lan15g0531 15 12350789 12353749 Lan1g1565 1 26367963 26371756 PCT