Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0530 ATGAGTGGAAATGCCAGAAATCGCTCTTCAAAATGGGATATGAGAGACAATCCTGAATTTGCACCTGATAATAAGCAATCACGGTCTTATTTTGAAGGAAATGATAAGTTAAAATCTGGAATGGGGTTTTCATCTAAGGAACCTTTTTATCGAGGCAGAATTTCAAATAAGGATGATATTATGAATAAAGACTACAGCGATTTGGATGAAACAATGGAATGGGATGCTGATGAAACTTACAACAAGAAATTTTCTCCAGGGTTTGAGGAACGAAAATACAAGAGACATAGTCAATCCCCAAAAAATCGTCGGAGCATGTCTGGCAGGAGTAGTCGGAGCAGGAGCCCTCCCCATGGTTTTAGGCGGGATTCAGGATTCAATGATAGAAATAAAACGAGGGCTGGAGGATTGACACAACCATGTAGAGAATTTGCTGCTGGTAAATGCAGAAGAGGTAGCCTTTGCCATTTTCTTCACCATGATAATCAAAATCACGAGGATAGTTGGGAAAGTAAGCACAGGGAAGATGGTGCTCCCAAATATTCTGCTTCCCATGATAGTAGAGACCATTCTCATAGGAGTGGTAGATCTAATGATGGATACAGTAAAGGTTCCATGGATGAATCAACTAGAGAAAGGGAAAATGATAGAAGACGGAGAGATTATTCTTTTGATCAGGGTGGTGGGCATGGGCCAAACCGTAGCGGTCTTACTTGCAAGTTTTTTGCAAATGGAAACTGCCGCAATGGTAAATCTTGTAGATTTTCTCATGATAAGCAAACATATGGGAGCCCTAATAGAAGATCAAGGGATGATACATGGGAGAGCAATCCGGGTGGAGATCATCAGACGTTGGATAGACCAAAATTGACTGATTCAGTTAGCCCTACTAGAAGACGAAGAGATGATAGATGGGGTTCAGATGGCAATATGGTAGAGAATGACAACTCAAAGCAGAATGATGCAGTAACTGTGTCTGATACAGAAAAGCTGGTTGAGGACACATGTGGAAATATAGGAGCCATCGATCCTGGATTCACTGCTTGGCCTACAAAGGATGGATGGGGTCATGGTTTAGATAATAACAGAGTGCATGGGGAACCAACATTTTCAAGTAATAAGAAGGAAAATGATCATCAGGTGGCAGAAAATGCTGGTTCCGACATGCACGTTTCCCAGCCAACAGGTCCAAGCAATTGGTCTGGTAATGAAATGCCTCTTGATTGGAATTACAGGATGGGATCTTCTAGTCGTATTCAAGAAGAGCATGAACAGAATAAACATGGGATAACCCAGGATGGTACATATTTAGCCACTGAACATGAAGGAACACAAGTTCCAGGGCAAGGATTTAATCAGAATGAACAGAACATAAATCCTTTGCATTCTTCAAGTGGCCATGCAGTTGGACAAAGTCGAGCTGATCTTCCCATTCTTCCTTCAAGAGGAATTGTTGAAAGAATACATGGCCAAGAAGTCTCTGCTGAGAAAAAGTACACTGTTGAACCAAATATCACAGATGCAGGCAATTCACAAGTTAGTTCAGGAAAGCCTCAAACTCAGAACATGGTAAGCAATGAACAGCTTGCTCAGCTGAGCAATCTCTCAGCCTCTCTTGCTCATATCCTTGGATCAGGTCAGCAATTACCACAGCTTTATGCTGCTTTAAATTCTCATGATGCAAAGGGCAGTCCCTCACTAGCCAAAACTGAAGTGCTAGCTATGCCTGTTTCCAATACATTCATTAAGCCAGAACCTGTCATTGGAATCACGAAGGAGTATGATCCAATGTCTGATAGTATTGAAACAAAAAATGTTGTTGCAAGTGGGGCTACCAAGGCTTTCTCTCTAAGTAAAAAAAATGCAGAAGATAAGGAGAAGAATGAAGTGGTAGTTGTGGAAAAGCAAAGCTCTCCAAGTGGTCATAAAAATACAAAAGAGAATGGTCCTTCAGAAAACATGGACCAAAATGGTGAACCTGATGACACCAAGAAAACAAAGGATGCAAAGGGGATCCGTGCATTTAAATTTGCATTGGTTGAGTTTGTTAAGGAACTTCTGAAACCAGCATGGAAAGAAGGTCAAATTAACAAAGAAGACTATAAAGCAATTGTGAAGAAAGTCGTTGATAAAGTAACTGGTACCATGCAGGGCGCCAATGTTCCCCAGACGCAAGAGAAAATTGACCACTATTTGTCATTCTCAAAATCAAAACTTAGCAAACTTGTACAGGCATATGTGGAGAAGGTTCAGAAAGCTTAA 2262 0.4103 MSGNARNRSSKWDMRDNPEFAPDNKQSRSYFEGNDKLKSGMGFSSKEPFYRGRISNKDDIMNKDYSDLDETMEWDADETYNKKFSPGFEERKYKRHSQSPKNRRSMSGRSSRSRSPPHGFRRDSGFNDRNKTRAGGLTQPCREFAAGKCRRGSLCHFLHHDNQNHEDSWESKHREDGAPKYSASHDSRDHSHRSGRSNDGYSKGSMDESTRERENDRRRRDYSFDQGGGHGPNRSGLTCKFFANGNCRNGKSCRFSHDKQTYGSPNRRSRDDTWESNPGGDHQTLDRPKLTDSVSPTRRRRDDRWGSDGNMVENDNSKQNDAVTVSDTEKLVEDTCGNIGAIDPGFTAWPTKDGWGHGLDNNRVHGEPTFSSNKKENDHQVAENAGSDMHVSQPTGPSNWSGNEMPLDWNYRMGSSSRIQEEHEQNKHGITQDGTYLATEHEGTQVPGQGFNQNEQNINPLHSSSGHAVGQSRADLPILPSRGIVERIHGQEVSAEKKYTVEPNITDAGNSQVSSGKPQTQNMVSNEQLAQLSNLSASLAHILGSGQQLPQLYAALNSHDAKGSPSLAKTEVLAMPVSNTFIKPEPVIGITKEYDPMSDSIETKNVVASGATKAFSLSKKNAEDKEKNEVVVVEKQSSPSGHKNTKENGPSENMDQNGEPDDTKKTKDAKGIRAFKFALVEFVKELLKPAWKEGQINKEDYKAIVKKVVDKVTGTMQGANVPQTQEKIDHYLSFSKSKLSKLVQAYVEKVQKA* 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0530 753 MobiDBLite consensus disorder prediction 261 277 - -
Lan15g0530 753 MobiDBLite consensus disorder prediction 625 667 - -
Lan15g0530 753 PANTHER ZINC FINGER CCCH DOMAIN PROTEIN-RELATED 619 751 - -
Lan15g0530 753 PANTHER ZINC FINGER CCCH DOMAIN PROTEIN-RELATED 1 625 - -
Lan15g0530 753 MobiDBLite consensus disorder prediction 163 235 - -
Lan15g0530 753 Pfam CCCH-type zinc finger 238 258 IPR041367 -
Lan15g0530 753 ProSiteProfiles Zinc finger C3H1-type profile. 135 162 IPR000571 GO:0046872
Lan15g0530 753 SUPERFAMILY CCCH zinc finger 234 258 IPR036855 GO:0046872
Lan15g0530 753 SMART c3hfinal6 135 161 IPR000571 GO:0046872
Lan15g0530 753 SMART c3hfinal6 234 259 IPR000571 GO:0046872
Lan15g0530 753 MobiDBLite consensus disorder prediction 205 225 - -
Lan15g0530 753 MobiDBLite consensus disorder prediction 310 326 - -
Lan15g0530 753 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 138 160 IPR000571 GO:0046872
Lan15g0530 753 MobiDBLite consensus disorder prediction 85 140 - -
Lan15g0530 753 PANTHER PROTEIN FRIGIDA-ESSENTIAL 1 619 751 - -
Lan15g0530 753 PANTHER PROTEIN FRIGIDA-ESSENTIAL 1 1 625 - -
Lan15g0530 753 ProSiteProfiles Zinc finger C3H1-type profile. 233 260 IPR000571 GO:0046872
Lan15g0530 753 MobiDBLite consensus disorder prediction 163 197 - -
Lan15g0530 753 MobiDBLite consensus disorder prediction 633 656 - -
Lan15g0530 753 Gene3D - 131 212 - -
Lan15g0530 753 MobiDBLite consensus disorder prediction 253 326 - -
Lan15g0530 753 MobiDBLite consensus disorder prediction 1 61 - -
Lan15g0530 753 MobiDBLite consensus disorder prediction 285 309 - -
Lan15g0530 753 Gene3D - 233 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0530 Lan-Chr15 12337970 12348841 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Lan15g0530 zf-CCCH 0.00017 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0530 - K22909 gmx:100783856 895.96