Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0526 ATGGATTCGGACGATTTCCGTACGATATTGGATTCTTCAGGTGTGGACGTGTGGTCGTTCATCGACACCGCAATCGCCGTCGCCGCGACGGATTCCGGCGATGAATTGAAGCGCCGGAGAGATGCTATCGTTGAGAGGCTGTACTCCGCCACCACTGCTCCTCCGCGGTGCCGGAATTGCGACGGAGGCAACCGTAGTGTCGTCGCTGCCAACGACGACAAAGCTAGGAAACAACAGAGGACCCGTAGCCCTAGCCCTAAACGACAATCACCACAACGCGAGCAACGACGTCGTTTTGCCTCCTCTCCGGAAACGCCACAGTCTCTCGAAAACGATGACGACGAAAACGACACCGATTTGGATCCTTACGGTGGCTTGTTCGACGATGAACAGAAGAAGATTCTGGAAATTAAGGAGCAGCTCGAAGAACCTGACCAGTCTGAAGATTCATTGGTGGATTTGCTTCAAAATCTCGCCGATATGGATATTACATTCCAAGCTCTGAGGGAAACTGACATTGGTAGGAATGTGAATCGGTTGAGGAAGCATTCGTCTAATGACATTCGCAGATTGGTGAAGCTACTTGTCAGGAAGTGGAAGGAAATTGTAGATGAGTGGGTGAAGTCAAATCCACAGGGAGAAGCTGCTACTCTTATGGCTGATGGAGACTCTTCCCCTCTTCAGAAAACCACCCAAAATGGGCATCATCATCAGATTCCTGATTTTGCTTACTCACCAAATCCACACAATGGGAGTTCTGGGTCTGACCGCAATGAAGCAGAGCTGAAACCAAAACCAAAACCAAAAGTGATTCCTTCTCGCAGAGAAGCACCACCTCCAAAACCAATTCCATCACCTTTACTTCATACCCCTGCTCCTTCTGCCCTTCAAAACAGGCAGAAAGAACTGAGAGAGAGCAATTTTGATGCGGAGAGACTTGCTTCTGCAAGAAAAAGGCTTCAAGAGAACTATAAAGAAGCTGAAAATGCCAAAAAGCAAAGGACAATTCAGGTTATGGACATTCATGAGTTACCAAAGACAAAATCCAAGAATACCTTCTTTGGAAAGAACAAAGGCAGTGGCGGTTCTCAGGGGAGGCACTGGTGA 1107 0.4824 MDSDDFRTILDSSGVDVWSFIDTAIAVAATDSGDELKRRRDAIVERLYSATTAPPRCRNCDGGNRSVVAANDDKARKQQRTRSPSPKRQSPQREQRRRFASSPETPQSLENDDDENDTDLDPYGGLFDDEQKKILEIKEQLEEPDQSEDSLVDLLQNLADMDITFQALRETDIGRNVNRLRKHSSNDIRRLVKLLVRKWKEIVDEWVKSNPQGEAATLMADGDSSPLQKTTQNGHHHQIPDFAYSPNPHNGSSGSDRNEAELKPKPKPKVIPSRREAPPPKPIPSPLLHTPAPSALQNRQKELRESNFDAERLASARKRLQENYKEAENAKKQRTIQVMDIHELPKTKSKNTFFGKNKGSGGSQGRHW* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0526 368 MobiDBLite consensus disorder prediction 223 238 - -
Lan15g0526 368 Coils Coil 310 337 - -
Lan15g0526 368 MobiDBLite consensus disorder prediction 256 274 - -
Lan15g0526 368 MobiDBLite consensus disorder prediction 216 293 - -
Lan15g0526 368 MobiDBLite consensus disorder prediction 53 126 - -
Lan15g0526 368 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26C-RELATED 1 368 - -
Lan15g0526 368 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26C-RELATED 1 368 IPR044790 -
Lan15g0526 368 MobiDBLite consensus disorder prediction 108 124 - -
Lan15g0526 368 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 128 216 IPR035441 -
Lan15g0526 368 SMART TFS2_5 134 205 IPR003617 GO:0005634
Lan15g0526 368 MobiDBLite consensus disorder prediction 275 289 - -
Lan15g0526 368 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 132 213 IPR035441 -
Lan15g0526 368 MobiDBLite consensus disorder prediction 343 368 - -
Lan15g0526 368 ProSiteProfiles TFIIS N-terminal domain profile. 129 206 IPR017923 -
Lan15g0526 368 CDD TFIIS_I 131 204 - -
Lan15g0526 368 Pfam TFIIS helical bundle-like domain 154 203 IPR017923 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0526 Lan-Chr15 12301285 12304317 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Lan15g0526 Med26 5.2e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0526 - - aip:107622503 494.582