Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0523 ATGATGGCAAGTGCAAGCATCAACCTTCCTCCTGGGTTTATCTTCTCTCCAACAGATGAAGAACTCGTCTTTCATTTTCTCTATTCTAAGGCTTCTCTTCTACCACGCCATCCCAACATTATCCCTGACCTTGATCTTTCTTTTCTAGATCCTTGGGAATTAAATGGTAAAGCTTTGTCAAGTGGAAATGACTACTATTTCTTCACAAAAGTGAAGGAACACAGAGGCACAGAAAATGGGTATTGGAGGGAAATAGGTGTAACCTATCCTATATTCTCAGCCATTGACAAGAAAGTAGGAATCAAGAAGTACCTTGTATTCCACGTTGGAGAGAGTCCACAAGGTACTGAAACAAGTTGGGTAATGCAAGAATATCATATTTGCTCTTTTGGGTCTGACACTTCATGTTACCAAAGCACTGCTAACAGAAGACAAAAACATGACCAAAGTTGGAGCAACTGGGTTTTATGTCGAGTGTATGAAAACAAGTCTCAAAACTTCTATTGCCATGACGATGACAGTGGATCAGAACTTTCATTGCTAGACGAAGTTTATATGTGCTTGGATGAAGATTTGGAAGAAATAAGCATGCCTAAATAG 600 0.395 MMASASINLPPGFIFSPTDEELVFHFLYSKASLLPRHPNIIPDLDLSFLDPWELNGKALSSGNDYYFFTKVKEHRGTENGYWREIGVTYPIFSAIDKKVGIKKYLVFHVGESPQGTETSWVMQEYHICSFGSDTSCYQSTANRRQKHDQSWSNWVLCRVYENKSQNFYCHDDDSGSELSLLDEVYMCLDEDLEEISMPK* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0523 199 SUPERFAMILY NAC domain 3 160 IPR036093 GO:0003677|GO:0006355
Lan15g0523 199 ProSiteProfiles NAC domain profile. 9 162 IPR003441 GO:0003677|GO:0006355
Lan15g0523 199 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 4 196 - -
Lan15g0523 199 PANTHER NAC TRANSCRIPTION FACTOR 56 4 196 - -
Lan15g0523 199 Pfam No apical meristem (NAM) protein 10 127 IPR003441 GO:0003677|GO:0006355
Lan15g0523 199 Gene3D NAC domain 18 167 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0523 Lan-Chr15 12220376 12221658 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0523 8 164 NAC Transcription Factor Family AT1G61110 40.000 3.52e-38 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lan15g0523 NAM 1.1e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0523 - - gmx:100170711 293.123