Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0522 ATGCAGAAACAAGGTTGTGAGATTGAGGCAATAGGTATCAACTACAATATCAGCACTCAGACAACAAAGCAACCTTTTAGAATCTTCAGTAAACCTCCACAACTTAGTAACGAAGAAAATGGAGCGGAAGCAGCAGAGGAAGCAAAAGCTGAACAAAGATTACGCAGCGTTAAGCATGTCCTCAAGGATGTGAATTGCAAGGTGAAGCCATGTGAAATTATGGCGATTGTAGGGCCAAGTGGAGCTGGTAAATCATCCCTTCTTAAGATTCTTGCTGGTAAAGTTAGCCCACAGAGTGGTTCTATCTTGATGAACAACAAGCCTGTAGATAAAGCTCAGTTCAGGAAGATCTCAGGGTATGTTACACAAAATGATACCCTTTTCCCCTTACTTACGGTTGAAGAAACCATCATGTTTAGTGCAAAGCTAAGGCTAAATCTTCCTCGAGAACAGATATGCTTAAGGGTTAAGTCAGTGATTCAGGAGCTTGGTCTTAGCCATGTTGCTAGGTCTAGAGTTGGAGATGAAAGGGTACGTGGTGTATCTGGTGGCGAGAAACGCCGGATTTCCATTGGTGTTGAAGTGATACATGATCCAAAAGTGTTGATTCTGGATGAACCAACTTCAGGACTTGACAGTGCCTCAGCTTTGCAAATGATTGATACGCTTAAGGTAATGTCTGACTCTAGGGGAAGAACTATAATCCTAAGTATCCACCAACCTGGGTTCAAGATAGTGAAGTTATTCAATTCAATGCTGTTGTTAGTCAATGGTTCTGTGTTACACCATGGCTCTGTGGATTTGCTTGATGTAAATCTAAGGTTAATGGGTTTAGAGCTTCCTCTTCATGTTAATGTAGTTGAGTTTGCCATTGAGTCCATCGAAACCATTCAAAGACAACAAAAATATCAGCAAGTTCAGCTTCGAGCACCACACCGATTGCCTGTAACAGTGCAACAAAAGAAAGGTGATGATCAAGGTGAGAGTAGAAGTAGTAAGTTTACACTGCAACAGCTCTTTCAACAATCCAGGGTAACTGATGCAGAAATCATCAATGTGGAAATGGATTTCCCATATGAATATGCTAATTCAAGATTCAGAGAAACTGTGATTCTCATTCATAGGTTCTCCAAAAACATTTTTCGCACAAAGGAGCTCTTTGCATTTAGAACAATTCAAATGCTGATTTCTGGATTGGTTTTGGGCTCTGTCTTTTGTAATCTTAAATATGGTATAGTGGGAGCAAGAGAAAGGGTGGGTCTATTTGCTTTCATTTTAACGTTTTTGTTGTCAAGCACCATGGAAGCTTTACCAGTTTTCCTGCAAGAAAGGGAGATTCTAATGAAGGAGACCTCTAGTGGAAGCTACAGAGTATCCTCATATGCTATTGCCAATGGCCTAGTCTACTTGCCATTTCTACTCATACTAGCCACCTTATTCACAATGCCCTTATATTTTCTTGTTGGTCTCAACAAGAATTTCACCGCATTTTTGCACTTTTTGTTGCTAATTTGGCTGATTCTTTATACAGCAAATTCAGTTGTGGTGTGTTTCAGTGCTCTGGTGCCTAATTTCATTGTTGGGAACTCAGTGATCAGTGGTGTCATTGGTTCATTCTTATTGTTCTCAGGCTACTTCATATCAAAGAAAGAAATTCCAAAATATTGGCTACCCATGCATTATATATCTCTATTTAAGTATCCATTTGAAGGGTTTCTGATAAATGAGTTCTCCAACTCAAAGAAGTGTTTGGGCTACATGTTTGGTGCATGTGTGGTGAGTGGAGAAGATATGCTTAAAGAAGAAGGGTATGGAGGAGAAAGTAGTAGATGGAAGAATGTTGGGGCGATGGTGTGCTTCATCTTGATTTACAGGTTCATTTCTTATGTAATTCTTAGATACCGATGCTCGCAGAGATGGTGA 1923 0.4004 MQKQGCEIEAIGINYNISTQTTKQPFRIFSKPPQLSNEENGAEAAEEAKAEQRLRSVKHVLKDVNCKVKPCEIMAIVGPSGAGKSSLLKILAGKVSPQSGSILMNNKPVDKAQFRKISGYVTQNDTLFPLLTVEETIMFSAKLRLNLPREQICLRVKSVIQELGLSHVARSRVGDERVRGVSGGEKRRISIGVEVIHDPKVLILDEPTSGLDSASALQMIDTLKVMSDSRGRTIILSIHQPGFKIVKLFNSMLLLVNGSVLHHGSVDLLDVNLRLMGLELPLHVNVVEFAIESIETIQRQQKYQQVQLRAPHRLPVTVQQKKGDDQGESRSSKFTLQQLFQQSRVTDAEIINVEMDFPYEYANSRFRETVILIHRFSKNIFRTKELFAFRTIQMLISGLVLGSVFCNLKYGIVGARERVGLFAFILTFLLSSTMEALPVFLQEREILMKETSSGSYRVSSYAIANGLVYLPFLLILATLFTMPLYFLVGLNKNFTAFLHFLLLIWLILYTANSVVVCFSALVPNFIVGNSVISGVIGSFLLFSGYFISKKEIPKYWLPMHYISLFKYPFEGFLINEFSNSKKCLGYMFGACVVSGEDMLKEEGYGGESSRWKNVGAMVCFILIYRFISYVILRYRCSQRW* 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0522 640 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 42 282 IPR003439 GO:0005524
Lan15g0522 640 PANTHER ABC TRANSPORTER G FAMILY MEMBER 5 1 633 - -
Lan15g0522 640 Pfam ABC-2 type transporter 369 577 IPR013525 GO:0016020|GO:0140359
Lan15g0522 640 Coils Coil 35 55 - -
Lan15g0522 640 Pfam ABC-2 type transporter 239 326 IPR043926 GO:0140359
Lan15g0522 640 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 58 268 IPR027417 -
Lan15g0522 640 ProSitePatterns ABC transporters family signature. 181 195 IPR017871 GO:0005524
Lan15g0522 640 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 1 633 - -
Lan15g0522 640 Pfam ABC transporter 61 209 IPR003439 GO:0005524
Lan15g0522 640 Gene3D - 47 320 IPR027417 -
Lan15g0522 640 SMART AAA_5 70 259 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0522 Lan-Chr15 12211561 12213722 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0522 26 269 Calmodulin-binding Proteins AT2G36910 26.154 1.32e-12 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0522 K05681 - gmx:121172640 979.163