Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0515 ATGAAGGGAGAATTAGAATTACCTGCTGGTTTCAGATTTCACCCCACCGACGAGGAATTAGTGATTCACTACTTGTGTACAAAATGTGCTTCCCAATCAATTTCTGTTCCAATCATCAAAGACATCGATTTATATAAATTTGATCCATGGCACCTTCCAGAAATGGCTCTTTATGGTGAAAAGGAGTGGTACTTCTTCTCTCCACGGGACCGGAAATATCCGAACGGTTCAAGGCCGAACCGGGCTGCTGGTTCAGGTTATTGGAAAGCAACGGGAGCAGACAAGCCGATTGGAAAACCGAAAGCACTTGGGATCAAGAAAGCACTTGTGTTCTATGCTGGTAAAGCCCCCAAAGGAATTAAAACCAATTGGATTATGCATGAATATCGCCTTGCCAATGTTGATAGAACCGCTTCCAACAAAAACAATAATTCAAGGCTTGATGATTGGGTATTATGCCGAATTTACAACAAGAAAGGGAAGATTGAGAAATATAACAGCACCGCTGTGAATCATAAAGTACCAAAATGTCCAGAGAATATTCATTTTCATTTTGACCATGAGAATATTGAGACCAAGCCAGAAATTCATAATTTTGGGAATAATCAATTGTACATGGACACGTCAGATTCAGTGCCCAGGTTGCACACGTACTCCAGCTGTTCTGAGCACGTGCTTTCACCAGATGTCACGTGGGAGAAGGAGGTTCAAAGTGAGTCCAAGTTGAATAAACTAGACCTAGATGATAATGCATTTGATCTTCAATTCAATTACATGGACGATAATAATTATAACCTGAACCTGTCTTTGGAGGATCCTTTTGGATCTCAGGTCCAGTTCCAAATGAATCCATTACAAGACATGTTCATGTACCTACAGGAGCCATTTTGA 891 0.4085 MKGELELPAGFRFHPTDEELVIHYLCTKCASQSISVPIIKDIDLYKFDPWHLPEMALYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKPKALGIKKALVFYAGKAPKGIKTNWIMHEYRLANVDRTASNKNNNSRLDDWVLCRIYNKKGKIEKYNSTAVNHKVPKCPENIHFHFDHENIETKPEIHNFGNNQLYMDTSDSVPRLHTYSSCSEHVLSPDVTWEKEVQSESKLNKLDLDDNAFDLQFNYMDDNNYNLNLSLEDPFGSQVQFQMNPLQDMFMYLQEPF* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0515 296 SUPERFAMILY NAC domain 3 158 IPR036093 GO:0003677|GO:0006355
Lan15g0515 296 Pfam No apical meristem (NAM) protein 8 131 IPR003441 GO:0003677|GO:0006355
Lan15g0515 296 PANTHER NAC DOMAIN-CONTAINING PROTEIN 2-LIKE 5 269 - -
Lan15g0515 296 ProSiteProfiles NAC domain profile. 7 158 IPR003441 GO:0003677|GO:0006355
Lan15g0515 296 PANTHER NAC TRANSCRIPTION FACTOR 56 5 269 - -
Lan15g0515 296 Gene3D NAC domain 16 163 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0515 Lan-Chr15 12099430 12101329 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0515 1 296 NAC Transcription Factor Family AT1G01720 59.936 1.71e-122 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lan15g0515 NAM 6.8e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0515 - - gmx:100814504 446.432