Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0509 ATGTCTGGAAAGGGAAAGAGAAAAGAGAATGACCATGCTTCCGACGACTCTGAAGGCCACGCGCCTCCCAATAAGACAGCCAAGAAAGATTCCGATGACCCTGACTCCATCGTCGTCTGCGAGATTTCGAAGAATAGGAGGGTTTCTGTGAGGAACTGGCAAGGCAAGATCGTTGTTGACATTCGTGAATTTTATCAGAAAGATGGAAAACAATTGCCTGGCAAAAAAGGTATCTCATTAACCATGGATCAGTGGAATGTGCTTCGTGATCACATTGAAGAAATTGATGAGGCAGTTAATGAGAATTCTTAG 312 0.4391 MSGKGKRKENDHASDDSEGHAPPNKTAKKDSDDPDSIVVCEISKNRRVSVRNWQGKIVVDIREFYQKDGKQLPGKKGISLTMDQWNVLRDHIEEIDEAVNENS* 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0509 103 Gene3D Transcriptional Coactivator Pc4; Chain A 28 103 IPR009044 GO:0003677|GO:0006355
Lan15g0509 103 Pfam Transcriptional Coactivator p15 (PC4) 40 91 IPR003173 GO:0003677|GO:0006355
Lan15g0509 103 MobiDBLite consensus disorder prediction 1 36 - -
Lan15g0509 103 PANTHER BNAC09G47220D PROTEIN 1 101 - -
Lan15g0509 103 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR 1 101 IPR045125 GO:0003713|GO:0060261
Lan15g0509 103 SUPERFAMILY ssDNA-binding transcriptional regulator domain 39 100 IPR009044 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0509 Lan-Chr15 12008919 12010698 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Lan15g0509 PC4 5.5e-26 CL0609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0509 K25815 - gmx:100820368 173.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0509 15 12008919 12010698 Lan15g0509 15 12008919 12010698 ECH