Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0503 ATGATGAGAATGACGTCATCAGAGATAACGATGAAGGGAAATGGTGGTGGTGAGGGACATAATGGTAATTTATCATGTATAGATGCAGAAGCTGCACTTTACAGAGAACTATGGTATGCTTGTGCTGGTCCTCTTGTTACTGTTCCACGGGAAAGAGAACTTGTCTTCTATTTCCCTCAAGGCCATATTGAGCAGGTGGAGGCGTCAACTAATCAGGTTGCGGAGCAGCAAATGCCAGTTTACGATCTCCCTTCTAAGATTCTTTGTCGTATCATGAACGTGCAGCTTAAGGCGGAGCCAGATACGGATGAGGTTTTTGCCCAAGTGACTTTACTTCCGGAGTCAAACCAAGATGTGAATGCTGTCGAGAAAGAGCCTCCACCACCTCCGCCGGCGCGATTCCATGTACATTCATTTTGTAAGACACTGACTGCTTCTGATACCAGCACCCATGGTGGGTTTTCCGTGTTAAGACGACATGCCGATGAATGTCTTCCTCCACTAGATATGACAAAGCAGCCACCCACTCAGGAATTGGTTGCTAAAGATTTGCATTCGAATGAGTGGCAATTTCGACATATCTTTCGCGGTCAACCACGTAGACACTTACTCCAAAGTGGCTGGAGTGTTTTTGTCAGCTCCAAGAGGCTAGTTGCTGGGGATGCATTTATATTTCTAAGAGGTGAGAATGGGGAACTTCGAGTTGGTGTCAGGCGAGCAATGAGACAGCAGGGTAATGTTCCATCTTCTGTTATCTCTAGTCACAGCATGAATCTTGGGGTCCTTGCTACTGCTTGGCATGCCATCTCGACTGGGACCATGTTCACTGTTTATTACAAGCCCAGGACCAGCCCAGCCGAATTTATTGTACCATACAATCAGTACATGGAATCTCTAAAAAATAGGTATACCATTGGGATGCGTTTTAAAATGAGGTTTGAAGGTGAAGAGGCTCCAGAGCAGAGGTTTACTGGTACCGTTGTTGGAATAGAAGATTCTGACTCGAAAAAGTGGCCAGATTCCAAATGGAGAAGCCTCAAGGTGAAATGGGATGAAACATCTAACATACCACGTCCTAATCGAGTTTCCCCGTGGAAAATAGAGCCTACTCTTGCTCCTTCGTCTCTGAACCCTCTTCCAATGCCCAGGCCTAAAAGGCCTCGGTCTAATGCAGTTCCATCATCTCCTAGTTCTCCTGTTCTTCCTCGAGAAGCATTATCTAAAGTTAGCTTACACCATTTACCAACAAATGGATTCCCAAGGGTCTTGCAAGGTCAGGAATTCTCGACCTTGAGAGGCAATTTTGAAGTTAGCAATGAGTTTGATACTGCCGAGAGGTCTGTTGCCCTGCCACCTGCAGTAGAAGATGAAAAGATTGATGTTTCTACTTTAAGAAGGCATGGATCAGAGAACTGGATATCAATGGGGAGGCATGAGCCTGCATATTCAGATCTTCTTTCAGGATTTGGCACCAGTGGAGATCCCTCCCATCAATCATCGGTTGATCAAATTTGTCTCGTAGCTTATCCTGCAAGTAAGCATTCTTTGGATCATGAATCCAACCTTCATGTGCATCATCCATGGCCTGTAATGCCCTCTAGTCTATCACTAAACTTCCTGGACTCTAATTCAAAAGGCTCTGCACTTGTTGATACAACTTACCAAGCTCGAGGGAATTTGAGGTGTGGTACAAGAGAGCTTATGTCTAAGCCAATGTCTGTGAAAACTAGTGAGGCTATGATACTTAAAGATGGTGACTGTAAGCTTTTTGGCATCTCACTTATCAGTAGCGACATTGCACCAAAGCATTCACTTCTAGAAAGAAATGCGATAAGTAATCCTGCTGGTCAAATGCATCTTACATCACACCAGCCACAAAGTTCTGAAGATGATCAGATGTCTGAACACTCGAAGAACTCAAAACCTTCAGATGGTCCAGTTGTCATGGGTGATCATGAAAAGCCAAAACTTCTTCAAGCCAAACCATTCTGTGTTTCTGCTAGGAGTTGCACCAAAGTTCACAAGAAGGGTATTGCGCTTGGTAGATCAGTTGACCTTACAAAGTACTGTGACTACAATGGATTAATTGCTGAATTGGATCGGCTGTTTGAATTTGGAGGTGAATTAATGTCACCAAACATGGACTGGCTTATTGTCTATACTGATAATGAGGGTGATATGATGCTTGTTGGTGATGATCCATGGCAGGAGTTCTGTGCTATGGTTCACAAAATATATATCTACCCTAAAGAGGAGATTCAGAAAATGAGCCCGGGTACCCTGAGTTCAAAAAATGAAGATAATTATTCAGCTAGCGAATGTGCAGAAGCAAAAGAAGTTAAAGGTCAGCTGAATCAGAAGTTAAATTCAGAAAGTGGCTTAATGCCTGCTAATTATTAA 2400 0.4367 MMRMTSSEITMKGNGGGEGHNGNLSCIDAEAALYRELWYACAGPLVTVPRERELVFYFPQGHIEQVEASTNQVAEQQMPVYDLPSKILCRIMNVQLKAEPDTDEVFAQVTLLPESNQDVNAVEKEPPPPPPARFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTKQPPTQELVAKDLHSNEWQFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMNLGVLATAWHAISTGTMFTVYYKPRTSPAEFIVPYNQYMESLKNRYTIGMRFKMRFEGEEAPEQRFTGTVVGIEDSDSKKWPDSKWRSLKVKWDETSNIPRPNRVSPWKIEPTLAPSSLNPLPMPRPKRPRSNAVPSSPSSPVLPREALSKVSLHHLPTNGFPRVLQGQEFSTLRGNFEVSNEFDTAERSVALPPAVEDEKIDVSTLRRHGSENWISMGRHEPAYSDLLSGFGTSGDPSHQSSVDQICLVAYPASKHSLDHESNLHVHHPWPVMPSSLSLNFLDSNSKGSALVDTTYQARGNLRCGTRELMSKPMSVKTSEAMILKDGDCKLFGISLISSDIAPKHSLLERNAISNPAGQMHLTSHQPQSSEDDQMSEHSKNSKPSDGPVVMGDHEKPKLLQAKPFCVSARSCTKVHKKGIALGRSVDLTKYCDYNGLIAELDRLFEFGGELMSPNMDWLIVYTDNEGDMMLVGDDPWQEFCAMVHKIYIYPKEEIQKMSPGTLSSKNEDNYSASECAEAKEVKGQLNQKLNSESGLMPANY* 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0503 799 Pfam AUX/IAA family 659 755 IPR033389 -
Lan15g0503 799 Pfam B3 DNA binding domain 139 240 IPR003340 GO:0003677
Lan15g0503 799 MobiDBLite consensus disorder prediction 779 799 - -
Lan15g0503 799 MobiDBLite consensus disorder prediction 375 389 - -
Lan15g0503 799 MobiDBLite consensus disorder prediction 359 401 - -
Lan15g0503 799 ProSiteProfiles PB1 domain profile. 668 750 IPR000270 GO:0005515
Lan15g0503 799 SUPERFAMILY DNA-binding pseudobarrel domain 135 268 IPR015300 -
Lan15g0503 799 MobiDBLite consensus disorder prediction 783 799 - -
Lan15g0503 799 ProSiteProfiles B3 DNA-binding domain profile. 139 241 IPR003340 GO:0003677
Lan15g0503 799 Gene3D - 664 757 - -
Lan15g0503 799 CDD B3_DNA 137 239 IPR003340 GO:0003677
Lan15g0503 799 MobiDBLite consensus disorder prediction 616 651 - -
Lan15g0503 799 Gene3D - 302 374 - -
Lan15g0503 799 Gene3D - 136 241 IPR015300 -
Lan15g0503 799 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 566 775 IPR044835 GO:0003677|GO:0006355|GO:0009725
Lan15g0503 799 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 25 564 IPR044835 GO:0003677|GO:0006355|GO:0009725
Lan15g0503 799 PANTHER AUXIN RESPONSE FACTOR 2 566 775 - -
Lan15g0503 799 PANTHER AUXIN RESPONSE FACTOR 2 25 564 - -
Lan15g0503 799 Pfam Auxin response factor 265 347 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Lan15g0503 799 SMART B3_2 139 241 IPR003340 GO:0003677
Lan15g0503 799 SUPERFAMILY CAD & PB1 domains 668 745 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0503 Lan-Chr15 11874482 11879533 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0503 4 790 B3 DNA Binding Superfamily AT5G62000 59.674 0.0 1006
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Lan15g0503 B3 2e-20 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0503 - - gmx:100803498 1190.25