Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0468 ATGTATTTCCAAAAACTCCAAGACTCCCCTATGTTCCGGCAACAGCTGCAGATAATGGAAGAAAGTTCAGAAGCGTTACGCTCTAGATGTTGGAAGTTCTATAAAGGTTGTCAAAAGTACACGGAAGGACTAGCAGAGGCATATGATGGAGACATTGCATTTGCAAGTGCTGTTGAAAATTTTGTTGGAGGGCATAATGATCCTTTATTTGTAACTTTGGGAGGACCTGTTATGGCCAAATTCACTATTGCTTTGAGAGAAATCAGTACACACAAGGAACTTCTTCGGTCAGAGGTTGAGCACATGCTGAATGATAGATTGTTGAACATACTAAATGTTGAAATCCTTGATGTCAAGGAAGCTCGAAGGCGCTTCGACAAATCTTCACTTGCATATGACCAGGCACGCGAAAAATTTATGTCATTGAGAAAAAGCACCAAGTTTGATACTGCTGCTGTCATAGAAGAGGAATTGCACAATGCAAGAAACTTATTTGAGGAAGCTCGTTTCAATCTGGTTAGTGCTCTTCATAATATTGAGGCCAAGAAGAGATTTGAGTTTTTGGAGGCTGTCACTGCAGTTATGGATGCTCATCTTCGATACTTTCAACAGGGATATCAGCTATTTCATGAGATGGAGCCTTTCATTCTTGAGGTTTTGGCGTATGCACAAAAGTCAAGAGAAAGTGCCAACGAGGAGCAAATTTCTCTTTGTGAAAGAATGGTACAATACAAACAACTAGTTCATGAAGAAAGTAGGTTGACCTTGAATGGTCCTTATAGTTCTGCTGCAGGAGACGGTATGCAACATTTTTGCAGGATATCGAATAAAGTGGTAGATGCAGTAACAGAATCTGCTGCAAATGGAAAGATTCAAATCATTAGACAAGGCTACCTTTCAAAACGATCCTCCAATTTGAGGGGTGACTGGAAGAGAAGGTACTTCGTACTTGATAGTCGTGGAATGCTATACTACTACCGTAAACCGTTGATTGGGTTACAAGGTGGCAATCAACCTTGTACACAAAGGAATTTTGCCACTGAAAATAGTTCGGGGATTCTGAGTCGGTTGCTTTCGTCACAATATCATGGAGTTATTCCGGACGATAGATCTGTAGCGCGTCATACAGTGAACCTGTTGACATCAACAATCAAGATTGATGCTGAGCAGTCAGATTTAAGATTCTGCTTCAGGATTATTTCACCATCAAAGATGTATACATTGCAGGCCGAAAATGCCCTTGACCAGATGGATTGGATGGAAAAGATAACTGGAGTAATTGCCTCCTTGTTGAGTGCACAGATACTGGAAACGCCTCGATCAGTTGACTCAGAAGGCAATGAATTTTACTCTGCAAGCAAGTTTGAGTTGTTACTAAATTCATCACAAGATGATCCGGCGATGAGTGGGGATTTTGCATCCAAGAACTTCACCCCAAATAGTTCACCTTTACGCACGCAAGGGAATAAAAAAAATATGAAAGGAGAAAAGCCAATTGATGTTCTTAGAAAGGTTAGCGGCAATGACAAATGTGCTGATTGTGGTAAACCTGAACCAGACTGGGCATCCTTGAACCTTGGCATCCTTTTATGCATTGAATGTTCTGGTGTTCATCGTAATCTTGGTGTACATATGTCAAAAGTAAGATCACTGACACTTGATGTGAAAGTCTGGGATTCCCCTGTCTTAACCTTGTTTCAGTCACTCGGCAATCTCTTCGCAAACTCAGTTTGGGAGGAGCTTTTGCATTCAACAAGTAATTCGGTAACGGATGACACAGCTGTGTGTTCTCCCAAGGCCACCAGAAACAAGTTATTTCATGCAAGAAAACCAGAACATGATGATCCTATTTCACTAAAGGAGAGGTTCATTCATGCAAAGTACGCAGAGAAGGTCTTTGTTCGCCGGGTGACAAAAAACAATCGTCTCCTTTCAGTGGCGCAACAGGTGTGGGAAAGCATATGCGCCAACGACAAGAAAGCAGTATATCGGCATATTATCAGATCAGATGTAGATGTCAATGCTATCAATGGACAAGCATTAGATGGTGATTCTTTCATCACTACTTGTTCAAGTAATTCAAATATATCACCACAAAGTATACATCAATTAATGGAAGACATACAAGAGGGTTCTAGTGTGCTTCACCTGGCATGCCTAACCTGTGATGCCGGAATGGTAGAGCTACTCCTACAGTGTGGAGCAGCTGTAAATGCTATTGACTCAAGAGGTAGGACACCACTACATTACTGCATTTTGAGAGGGAAGATTGCAGCAGCAAAAGTGCTTATTACAAGAGGGGGCAATCCAAATATGGTAGATAAAGAAGGCAACACTCCTCTTAAGTTTGCATCTGAACTCTGCACTGTAAGCAATGAAGTTGACTCTCTCTTAACAGGCACCAGATAA 2409 0.4139 MYFQKLQDSPMFRQQLQIMEESSEALRSRCWKFYKGCQKYTEGLAEAYDGDIAFASAVENFVGGHNDPLFVTLGGPVMAKFTIALREISTHKELLRSEVEHMLNDRLLNILNVEILDVKEARRRFDKSSLAYDQAREKFMSLRKSTKFDTAAVIEEELHNARNLFEEARFNLVSALHNIEAKKRFEFLEAVTAVMDAHLRYFQQGYQLFHEMEPFILEVLAYAQKSRESANEEQISLCERMVQYKQLVHEESRLTLNGPYSSAAGDGMQHFCRISNKVVDAVTESAANGKIQIIRQGYLSKRSSNLRGDWKRRYFVLDSRGMLYYYRKPLIGLQGGNQPCTQRNFATENSSGILSRLLSSQYHGVIPDDRSVARHTVNLLTSTIKIDAEQSDLRFCFRIISPSKMYTLQAENALDQMDWMEKITGVIASLLSAQILETPRSVDSEGNEFYSASKFELLLNSSQDDPAMSGDFASKNFTPNSSPLRTQGNKKNMKGEKPIDVLRKVSGNDKCADCGKPEPDWASLNLGILLCIECSGVHRNLGVHMSKVRSLTLDVKVWDSPVLTLFQSLGNLFANSVWEELLHSTSNSVTDDTAVCSPKATRNKLFHARKPEHDDPISLKERFIHAKYAEKVFVRRVTKNNRLLSVAQQVWESICANDKKAVYRHIIRSDVDVNAINGQALDGDSFITTCSSNSNISPQSIHQLMEDIQEGSSVLHLACLTCDAGMVELLLQCGAAVNAIDSRGRTPLHYCILRGKIAAAKVLITRGGNPNMVDKEGNTPLKFASELCTVSNEVDSLLTGTR* 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0468 802 SUPERFAMILY PH domain-like 292 441 - -
Lan15g0468 802 MobiDBLite consensus disorder prediction 473 493 - -
Lan15g0468 802 CDD BAR_SFC_plant 15 215 IPR035670 -
Lan15g0468 802 SMART arf_gap_3 496 641 IPR001164 GO:0005096
Lan15g0468 802 SUPERFAMILY ArfGap/RecO-like zinc finger 497 636 IPR037278 -
Lan15g0468 802 Pfam Putative GTPase activating protein for Arf 499 635 IPR001164 GO:0005096
Lan15g0468 802 PANTHER CENTAURIN/ARF 1 799 IPR045258 GO:0005096
Lan15g0468 802 MobiDBLite consensus disorder prediction 473 489 - -
Lan15g0468 802 CDD PH_ACAP 295 432 - -
Lan15g0468 802 Pfam BAR domain of APPL family 6 233 - -
Lan15g0468 802 ProSiteProfiles ARF GTPase-activating proteins domain profile. 496 641 IPR001164 GO:0005096
Lan15g0468 802 SMART ANK_2a 710 739 IPR002110 GO:0005515
Lan15g0468 802 SMART ANK_2a 743 772 IPR002110 GO:0005515
Lan15g0468 802 ProSiteProfiles PH domain profile. 292 428 IPR001849 -
Lan15g0468 802 Gene3D Arf GTPase activating protein 478 637 IPR038508 -
Lan15g0468 802 Pfam PH domain 294 427 IPR001849 -
Lan15g0468 802 SMART 5bar 2 218 IPR004148 GO:0005515|GO:0005737
Lan15g0468 802 CDD ArfGap 499 628 - -
Lan15g0468 802 ProSiteProfiles Ankyrin repeat profile. 710 742 IPR002110 GO:0005515
Lan15g0468 802 Coils Coil 118 138 - -
Lan15g0468 802 Pfam Ankyrin repeats (many copies) 730 784 IPR002110 GO:0005515
Lan15g0468 802 Gene3D Arfaptin homology (AH) domain/BAR domain 3 249 IPR027267 -
Lan15g0468 802 SMART PH_update 293 430 IPR001849 -
Lan15g0468 802 SUPERFAMILY BAR/IMD domain-like 6 315 IPR027267 -
Lan15g0468 802 ProSiteProfiles Ankyrin repeat region circular profile. 743 775 - -
Lan15g0468 802 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD1 1 799 - -
Lan15g0468 802 Gene3D - 638 790 IPR036770 -
Lan15g0468 802 SUPERFAMILY Ankyrin repeat 655 786 IPR036770 -
Lan15g0468 802 Gene3D - 285 440 IPR011993 -
Lan15g0468 802 ProSiteProfiles Ankyrin repeat profile. 743 775 IPR002110 GO:0005515
Lan15g0468 802 PRINTS HIV Rev interacting protein signature 508 527 IPR001164 GO:0005096
Lan15g0468 802 PRINTS HIV Rev interacting protein signature 527 544 IPR001164 GO:0005096
Lan15g0468 802 PRINTS HIV Rev interacting protein signature 550 571 IPR001164 GO:0005096
Lan15g0468 802 ProSiteProfiles Ankyrin repeat region circular profile. 710 741 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0468 Lan-Chr15 10910213 10927241 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0468 488 635 C2H2 Transcription Factor Family AT4G21160 36.242 5.62e-20 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0468 K12489 - gmx:100797073 1144.03